RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 LCE1AQ5T7P2 110 aa0.94□□□□□ -2.26
TRAPPC13-211ENST00000512009 A0A0G2JQZ4 141 aa0.93□□□□□ -2.26
TRAPPC13-211ENST00000512009 A8MUU9 505 aa0.93□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
TRAPPC13-211ENST00000512009 ANAPC11Q9NYG5 84 aa0.93□□□□□ -2.26
TRAPPC13-211ENST00000512009 DSTQ03001 7570 aaKnown RBP0.93□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP25-1Q3LHN0 102 aa0.92□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP10-6P60371 365 aaPredicted RBP0.92□□□□□ -2.26
TRAPPC13-211ENST00000512009 C10orf95Q9H7T3 257 aa0.91□□□□□ -2.26
TRAPPC13-211ENST00000512009 Q5VV11 94 aa0.91□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP4-1Q9BYQ7 146 aa0.9□□□□□ -2.26
TRAPPC13-211ENST00000512009 KRTAP13-4Q3LI77 160 aa0.9□□□□□ -2.27
TRAPPC13-211ENST00000512009 MUC19Q7Z5P9 8384 aa0.9□□□□□ -2.27
TRAPPC13-211ENST00000512009 A6NN06 94 aa0.89□□□□□ -2.27
TRAPPC13-211ENST00000512009 KRTAP9-6A8MVA2 160 aa0.89□□□□□ -2.27
TRAPPC13-211ENST00000512009 KRTAP10-10P60014 251 aa0.89□□□□□ -2.27
TRAPPC13-211ENST00000512009 KRTAP19-8Q3LI54 63 aa0.89□□□□□ -2.27
TRAPPC13-211ENST00000512009 LINC00472Q9H8W2 130 aa0.89□□□□□ -2.27
TRAPPC13-211ENST00000512009 KRTAP12-2P59991 146 aa0.88□□□□□ -2.27
TRAPPC13-211ENST00000512009 KRTAP2-2Q9BYT5 123 aa0.88□□□□□ -2.27
TRAPPC13-211ENST00000512009 KRTAP2-1Q9BYU5 128 aa0.88□□□□□ -2.27
TRAPPC13-211ENST00000512009 KRTAP5-1Q6L8H4 278 aa0.87□□□□□ -2.27
TRAPPC13-211ENST00000512009 KRTAP10-1P60331 282 aa0.86□□□□□ -2.27
TRAPPC13-211ENST00000512009 KRTAP10-12P60413 245 aa0.84□□□□□ -2.28
TRAPPC13-211ENST00000512009 TPRXLQ17RH7 258 aa0.84□□□□□ -2.28
TRAPPC13-211ENST00000512009 KRTAP13-2Q52LG2 175 aa0.83□□□□□ -2.28
TRAPPC13-211ENST00000512009 LCE4AQ5TA78 99 aa0.83□□□□□ -2.28
TRAPPC13-211ENST00000512009 KRTAP10-2P60368 255 aa0.83□□□□□ -2.28
TRAPPC13-211ENST00000512009 KRTAP15-1Q3LI76 137 aa0.83□□□□□ -2.28
TRAPPC13-211ENST00000512009 MT1HP80294 61 aa0.81□□□□□ -2.28
TRAPPC13-211ENST00000512009 INE1O15225 51 aa0.81□□□□□ -2.28
TRAPPC13-211ENST00000512009 H0YAA0 97 aa0.81□□□□□ -2.28
TRAPPC13-211ENST00000512009 KRTAP10-7P60409 375 aaPredicted RBP0.8□□□□□ -2.28
TRAPPC13-211ENST00000512009 KRTAP23-1A1A580 65 aa0.78□□□□□ -2.28
TRAPPC13-211ENST00000512009 KRTAP19-4Q3LI73 84 aa0.77□□□□□ -2.29
TRAPPC13-211ENST00000512009 KRTAP10-5P60370 271 aa0.77□□□□□ -2.29
TRAPPC13-211ENST00000512009 SPRR2GQ9BYE4 73 aa0.77□□□□□ -2.29
TRAPPC13-211ENST00000512009 KRTAP19-7Q3SYF9 63 aa0.76□□□□□ -2.29
TRAPPC13-211ENST00000512009 MT1BP07438 61 aa0.76□□□□□ -2.29
TRAPPC13-211ENST00000512009 KRTAP19-5Q3LI72 72 aa0.75□□□□□ -2.29
TRAPPC13-211ENST00000512009 MT2AP02795 61 aa0.75□□□□□ -2.29
TRAPPC13-211ENST00000512009 MT3P25713 68 aa0.74□□□□□ -2.29
TRAPPC13-211ENST00000512009 LCE3CQ5T5A8 94 aa0.74□□□□□ -2.29
TRAPPC13-211ENST00000512009 MT1XP80297 61 aa0.73□□□□□ -2.29
TRAPPC13-211ENST00000512009 KRTAP8-1Q8IUC2 63 aa0.71□□□□□ -2.3
TRAPPC13-211ENST00000512009 KRTAP12-3P60328 96 aa0.71□□□□□ -2.3
TRAPPC13-211ENST00000512009 LCE3EQ5T5B0 92 aa0.71□□□□□ -2.3
TRAPPC13-211ENST00000512009 KRTAP12-1P59990 96 aa0.7□□□□□ -2.3
TRAPPC13-211ENST00000512009 MT1FP04733 61 aa0.7□□□□□ -2.3
TRAPPC13-211ENST00000512009 KRTAP12-4P60329 112 aa0.68□□□□□ -2.3
TRAPPC13-211ENST00000512009 LCE1EQ5T753 118 aa0.66□□□□□ -2.3
TRAPPC13-211ENST00000512009 LCE3DQ9BYE3 92 aa0.66□□□□□ -2.3
TRAPPC13-211ENST00000512009 KRTAP4-3Q9BYR4 195 aa0.65□□□□□ -2.3
TRAPPC13-211ENST00000512009 SPRR2FQ96RM1 72 aa0.64□□□□□ -2.31
TRAPPC13-211ENST00000512009 LCE1FQ5T754 118 aa0.64□□□□□ -2.31
TRAPPC13-211ENST00000512009 KRTAP20-2Q3LI61 65 aa0.6□□□□□ -2.31
TRAPPC13-211ENST00000512009 LCE3AQ5TA76 89 aa0.59□□□□□ -2.32
TRAPPC13-211ENST00000512009 SPRR2EP22531 72 aa0.58□□□□□ -2.32
TRAPPC13-211ENST00000512009 SPRR2BP35325 72 aa0.58□□□□□ -2.32
TRAPPC13-211ENST00000512009 SPRR2AP35326 72 aa0.58□□□□□ -2.32
TRAPPC13-211ENST00000512009 SPRR2DP22532 72 aa0.58□□□□□ -2.32
TRAPPC13-211ENST00000512009 MT1GP13640 62 aa0.58□□□□□ -2.32
TRAPPC13-211ENST00000512009 LCE1CQ5T751 118 aa0.58□□□□□ -2.32
TRAPPC13-211ENST00000512009 LCE1BQ5T7P3 118 aa0.58□□□□□ -2.32
TRAPPC13-211ENST00000512009 MT1EP04732 61 aa0.57□□□□□ -2.32
TRAPPC13-211ENST00000512009 MT1LQ93083 61 aa0.56□□□□□ -2.32
TRAPPC13-211ENST00000512009 MT1MQ8N339 61 aa0.55□□□□□ -2.32
TRAPPC13-211ENST00000512009 KRTAP19-3Q7Z4W3 81 aa0.53□□□□□ -2.32
TRAPPC13-211ENST00000512009 KRTAP21-2Q3LI59 83 aa0.49□□□□□ -2.33
TRAPPC13-211ENST00000512009 KRTAP6-1Q3LI64 71 aa0.49□□□□□ -2.33
TRAPPC13-211ENST00000512009 MT4P47944 62 aa0.48□□□□□ -2.33
TRAPPC13-211ENST00000512009 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
TRAPPC13-211ENST00000512009 MT1AP04731 61 aa0.47□□□□□ -2.33
TRAPPC13-211ENST00000512009 PRM1P04553 51 aa0.44□□□□□ -2.34
TRAPPC13-211ENST00000512009 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
TRAPPC13-211ENST00000512009 KRTAP6-2Q3LI66 62 aa0.36□□□□□ -2.35
TRAPPC13-211ENST00000512009 MUC16Q8WXI7 14507 aa0.34□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 44 ms