RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 SPATA8Q6RVD6 105 aa4.48□□□□□ -1.69
RNF4-216ENST00000511859 PRR15LQ9BU68 103 aa4.46□□□□□ -1.7
RNF4-216ENST00000511859 A0A0D9SG42 100 aa4.44□□□□□ -1.7
RNF4-216ENST00000511859 MT4P47944 62 aa4.42□□□□□ -1.7
RNF4-216ENST00000511859 SMIM26A0A096LP01 95 aa4.41□□□□□ -1.7
RNF4-216ENST00000511859 PSPHP1O15172 72 aa4.4□□□□□ -1.7
RNF4-216ENST00000511859 RPS28P62857 69 aaKnown RBP4.4□□□□□ -1.71
RNF4-216ENST00000511859 Q1T7F1 81 aa4.4□□□□□ -1.71
RNF4-216ENST00000511859 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
RNF4-216ENST00000511859 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
RNF4-216ENST00000511859 V9GYY9 64 aa4.39□□□□□ -1.71
RNF4-216ENST00000511859 A8MU10 97 aa4.38□□□□□ -1.71
RNF4-216ENST00000511859 SPINT4Q6UDR6 99 aa4.35□□□□□ -1.71
RNF4-216ENST00000511859 UQCR11O14957 56 aa4.33□□□□□ -1.72
RNF4-216ENST00000511859 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
RNF4-216ENST00000511859 MT1EP04732 61 aa4.31□□□□□ -1.72
RNF4-216ENST00000511859 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
RNF4-216ENST00000511859 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
RNF4-216ENST00000511859 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
RNF4-216ENST00000511859 MT1GP13640 62 aa4.27□□□□□ -1.73
RNF4-216ENST00000511859 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
RNF4-216ENST00000511859 A6NED7 52 aa4.25□□□□□ -1.73
RNF4-216ENST00000511859 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
RNF4-216ENST00000511859 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
RNF4-216ENST00000511859 MT1MQ8N339 61 aa4.14□□□□□ -1.75
RNF4-216ENST00000511859 K7ERS5 55 aa4.12□□□□□ -1.75
RNF4-216ENST00000511859 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
RNF4-216ENST00000511859 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
RNF4-216ENST00000511859 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
RNF4-216ENST00000511859 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
RNF4-216ENST00000511859 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
RNF4-216ENST00000511859 MT1LQ93083 61 aa4.03□□□□□ -1.76
RNF4-216ENST00000511859 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
RNF4-216ENST00000511859 TNP1P09430 55 aa4.02□□□□□ -1.77
RNF4-216ENST00000511859 BRK1Q8WUW1 75 aa4□□□□□ -1.77
RNF4-216ENST00000511859 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
RNF4-216ENST00000511859 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
RNF4-216ENST00000511859 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
RNF4-216ENST00000511859 ROMO1P60602 79 aa3.91□□□□□ -1.78
RNF4-216ENST00000511859 KRTAP25-1Q3LHN0 102 aa3.91□□□□□ -1.78
RNF4-216ENST00000511859 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
RNF4-216ENST00000511859 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
RNF4-216ENST00000511859 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
RNF4-216ENST00000511859 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
RNF4-216ENST00000511859 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
RNF4-216ENST00000511859 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
RNF4-216ENST00000511859 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
RNF4-216ENST00000511859 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
RNF4-216ENST00000511859 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
RNF4-216ENST00000511859 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
RNF4-216ENST00000511859 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
RNF4-216ENST00000511859 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
RNF4-216ENST00000511859 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
RNF4-216ENST00000511859 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
RNF4-216ENST00000511859 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
RNF4-216ENST00000511859 KTN1-AS1Q86SY8 53 aa3.48□□□□□ -1.85
RNF4-216ENST00000511859 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
RNF4-216ENST00000511859 MT1AP04731 61 aa3.43□□□□□ -1.86
RNF4-216ENST00000511859 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
RNF4-216ENST00000511859 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
RNF4-216ENST00000511859 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
RNF4-216ENST00000511859 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
RNF4-216ENST00000511859 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
RNF4-216ENST00000511859 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
RNF4-216ENST00000511859 MT3P25713 68 aa3.19□□□□□ -1.9
RNF4-216ENST00000511859 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
RNF4-216ENST00000511859 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
RNF4-216ENST00000511859 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
RNF4-216ENST00000511859 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
RNF4-216ENST00000511859 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
RNF4-216ENST00000511859 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
RNF4-216ENST00000511859 INE1O15225 51 aa2.41□□□□□ -2.02
RNF4-216ENST00000511859 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
RNF4-216ENST00000511859 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
RNF4-216ENST00000511859 PRM1P04553 51 aa2.05□□□□□ -2.08
RNF4-216ENST00000511859 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
RNF4-216ENST00000511859 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 164.3 ms