RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 PRR15LQ9BU68 103 aa2.34□□□□□ -2.03
PROM1-211ENST00000511153 A0A1B0GU33 70 aa2.32□□□□□ -2.04
PROM1-211ENST00000511153 LINC01558Q9Y6Z2 57 aa2.32□□□□□ -2.04
PROM1-211ENST00000511153 A8MU10 97 aa2.32□□□□□ -2.04
PROM1-211ENST00000511153 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
PROM1-211ENST00000511153 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
PROM1-211ENST00000511153 KRTAP6-3Q3LI67 103 aa2.31□□□□□ -2.04
PROM1-211ENST00000511153 PLAC4Q8WY50 150 aa2.31□□□□□ -2.04
PROM1-211ENST00000511153 CDC42SE1Q9NRR8 79 aa2.31□□□□□ -2.04
PROM1-211ENST00000511153 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
PROM1-211ENST00000511153 SPINT4Q6UDR6 99 aa2.29□□□□□ -2.04
PROM1-211ENST00000511153 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
PROM1-211ENST00000511153 ROMO1P60602 79 aa2.27□□□□□ -2.05
PROM1-211ENST00000511153 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
PROM1-211ENST00000511153 MT1XP80297 61 aa2.26□□□□□ -2.05
PROM1-211ENST00000511153 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
PROM1-211ENST00000511153 MUC12Q9UKN1 5478 aa2.25□□□□□ -2.05
PROM1-211ENST00000511153 KRTAP12-2P59991 146 aa2.25□□□□□ -2.05
PROM1-211ENST00000511153 KMT2DO14686 5537 aa2.25□□□□□ -2.05
PROM1-211ENST00000511153 KRTAP12-1P59990 96 aa2.24□□□□□ -2.05
PROM1-211ENST00000511153 UQCR11O14957 56 aa2.22□□□□□ -2.05
PROM1-211ENST00000511153 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
PROM1-211ENST00000511153 PRO2289Q9P1D8 64 aa2.2□□□□□ -2.06
PROM1-211ENST00000511153 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
PROM1-211ENST00000511153 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
PROM1-211ENST00000511153 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.06
PROM1-211ENST00000511153 C10orf95Q9H7T3 257 aa2.15□□□□□ -2.07
PROM1-211ENST00000511153 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
PROM1-211ENST00000511153 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
PROM1-211ENST00000511153 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
PROM1-211ENST00000511153 KRTAP9-6A8MVA2 160 aa2.12□□□□□ -2.07
PROM1-211ENST00000511153 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
PROM1-211ENST00000511153 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
PROM1-211ENST00000511153 SPRR2FQ96RM1 72 aa2.1□□□□□ -2.07
PROM1-211ENST00000511153 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
PROM1-211ENST00000511153 KRTAP2-1Q9BYU5 128 aa2.07□□□□□ -2.08
PROM1-211ENST00000511153 TNP1P09430 55 aa2.06□□□□□ -2.08
PROM1-211ENST00000511153 LCE3AQ5TA76 89 aa2.06□□□□□ -2.08
PROM1-211ENST00000511153 KRTAP19-5Q3LI72 72 aa2.04□□□□□ -2.08
PROM1-211ENST00000511153 SPRR2EP22531 72 aa2.03□□□□□ -2.08
PROM1-211ENST00000511153 SPRR2BP35325 72 aa2.03□□□□□ -2.08
PROM1-211ENST00000511153 SPRR2AP35326 72 aa2.03□□□□□ -2.08
PROM1-211ENST00000511153 KRTAP19-7Q3SYF9 63 aa2.01□□□□□ -2.09
PROM1-211ENST00000511153 MT1EP04732 61 aa1.98□□□□□ -2.09
PROM1-211ENST00000511153 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
PROM1-211ENST00000511153 SPRR5A0A1B0GTR4 108 aa1.98□□□□□ -2.09
PROM1-211ENST00000511153 SPRR2DP22532 72 aa1.95□□□□□ -2.1
PROM1-211ENST00000511153 KRTAP12-3P60328 96 aa1.95□□□□□ -2.1
PROM1-211ENST00000511153 DSTQ03001 7570 aaKnown RBP1.94□□□□□ -2.1
PROM1-211ENST00000511153 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
PROM1-211ENST00000511153 KRTAP19-3Q7Z4W3 81 aa1.93□□□□□ -2.1
PROM1-211ENST00000511153 MT1LQ93083 61 aa1.93□□□□□ -2.1
PROM1-211ENST00000511153 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.1
PROM1-211ENST00000511153 MT1MQ8N339 61 aa1.89□□□□□ -2.11
PROM1-211ENST00000511153 MT1GP13640 62 aa1.87□□□□□ -2.11
PROM1-211ENST00000511153 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
PROM1-211ENST00000511153 PP632Q6XCG6 107 aa1.85□□□□□ -2.11
PROM1-211ENST00000511153 INE1O15225 51 aa1.84□□□□□ -2.12
PROM1-211ENST00000511153 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
PROM1-211ENST00000511153 MT4P47944 62 aa1.75□□□□□ -2.13
PROM1-211ENST00000511153 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
PROM1-211ENST00000511153 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
PROM1-211ENST00000511153 KRTAP6-1Q3LI64 71 aa1.65□□□□□ -2.15
PROM1-211ENST00000511153 SYNE1Q8NF91 8797 aaKnown RBP1.64□□□□□ -2.15
PROM1-211ENST00000511153 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
PROM1-211ENST00000511153 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
PROM1-211ENST00000511153 MT1AP04731 61 aa1.62□□□□□ -2.15
PROM1-211ENST00000511153 KRTAP12-4P60329 112 aa1.61□□□□□ -2.15
PROM1-211ENST00000511153 KRTAP20-2Q3LI61 65 aa1.59□□□□□ -2.15
PROM1-211ENST00000511153 KRTAP6-2Q3LI66 62 aa1.55□□□□□ -2.16
PROM1-211ENST00000511153 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
PROM1-211ENST00000511153 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
PROM1-211ENST00000511153 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
PROM1-211ENST00000511153 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
PROM1-211ENST00000511153 KRTAP21-2Q3LI59 83 aa1.09□□□□□ -2.23
PROM1-211ENST00000511153 PRM1P04553 51 aa1.08□□□□□ -2.24
PROM1-211ENST00000511153 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
PROM1-211ENST00000511153 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 53.1 ms