RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
NR1I3-227ENST00000510951 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.78
NR1I3-227ENST00000510951 SPRR2EP22531 72 aa3.94□□□□□ -1.78
NR1I3-227ENST00000510951 SPRR2BP35325 72 aa3.94□□□□□ -1.78
NR1I3-227ENST00000510951 SPRR2AP35326 72 aa3.94□□□□□ -1.78
NR1I3-227ENST00000510951 NEBP20929 6669 aa3.92□□□□□ -1.78
NR1I3-227ENST00000510951 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
NR1I3-227ENST00000510951 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
NR1I3-227ENST00000510951 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
NR1I3-227ENST00000510951 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
NR1I3-227ENST00000510951 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
NR1I3-227ENST00000510951 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
NR1I3-227ENST00000510951 MT1EP04732 61 aa3.85□□□□□ -1.79
NR1I3-227ENST00000510951 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
NR1I3-227ENST00000510951 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
NR1I3-227ENST00000510951 ROMO1P60602 79 aa3.81□□□□□ -1.8
NR1I3-227ENST00000510951 SPRR2DP22532 72 aa3.8□□□□□ -1.8
NR1I3-227ENST00000510951 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
NR1I3-227ENST00000510951 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
NR1I3-227ENST00000510951 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
NR1I3-227ENST00000510951 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
NR1I3-227ENST00000510951 MT1LQ93083 61 aa3.72□□□□□ -1.81
NR1I3-227ENST00000510951 KRTAP2-3P0C7H8 128 aa3.71□□□□□ -1.82
NR1I3-227ENST00000510951 KRTAP2-4Q9BYR9 128 aa3.71□□□□□ -1.82
NR1I3-227ENST00000510951 MT1GP13640 62 aa3.67□□□□□ -1.82
NR1I3-227ENST00000510951 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
NR1I3-227ENST00000510951 MT1MQ8N339 61 aa3.66□□□□□ -1.82
NR1I3-227ENST00000510951 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
NR1I3-227ENST00000510951 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
NR1I3-227ENST00000510951 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
NR1I3-227ENST00000510951 PMAIP1Q13794 54 aa3.57□□□□□ -1.84
NR1I3-227ENST00000510951 PRO0628Q9UI54 55 aa3.5□□□□□ -1.85
NR1I3-227ENST00000510951 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
NR1I3-227ENST00000510951 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
NR1I3-227ENST00000510951 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
NR1I3-227ENST00000510951 MT3P25713 68 aa3.39□□□□□ -1.87
NR1I3-227ENST00000510951 MT4P47944 62 aa3.32□□□□□ -1.88
NR1I3-227ENST00000510951 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
NR1I3-227ENST00000510951 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
NR1I3-227ENST00000510951 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
NR1I3-227ENST00000510951 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
NR1I3-227ENST00000510951 HMCN1Q96RW7 5635 aa3.18□□□□□ -1.9
NR1I3-227ENST00000510951 MT1AP04731 61 aa3.16□□□□□ -1.9
NR1I3-227ENST00000510951 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
NR1I3-227ENST00000510951 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
NR1I3-227ENST00000510951 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
NR1I3-227ENST00000510951 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
NR1I3-227ENST00000510951 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
NR1I3-227ENST00000510951 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
NR1I3-227ENST00000510951 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
NR1I3-227ENST00000510951 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
NR1I3-227ENST00000510951 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
NR1I3-227ENST00000510951 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
NR1I3-227ENST00000510951 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
NR1I3-227ENST00000510951 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
NR1I3-227ENST00000510951 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
NR1I3-227ENST00000510951 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
NR1I3-227ENST00000510951 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
NR1I3-227ENST00000510951 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
NR1I3-227ENST00000510951 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
NR1I3-227ENST00000510951 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
NR1I3-227ENST00000510951 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
NR1I3-227ENST00000510951 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
NR1I3-227ENST00000510951 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
NR1I3-227ENST00000510951 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
NR1I3-227ENST00000510951 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
NR1I3-227ENST00000510951 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
NR1I3-227ENST00000510951 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
NR1I3-227ENST00000510951 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
NR1I3-227ENST00000510951 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
NR1I3-227ENST00000510951 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
NR1I3-227ENST00000510951 INE1O15225 51 aa2.19□□□□□ -2.06
NR1I3-227ENST00000510951 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
NR1I3-227ENST00000510951 PRM1P04553 51 aa1.99□□□□□ -2.09
NR1I3-227ENST00000510951 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
NR1I3-227ENST00000510951 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
NR1I3-227ENST00000510951 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
NR1I3-227ENST00000510951 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 128.5 ms