RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
PDPN-209ENST00000510906 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
PDPN-209ENST00000510906 MT1XP80297 61 aa3.61□□□□□ -1.83
PDPN-209ENST00000510906 R4GN34 69 aa3.61□□□□□ -1.83
PDPN-209ENST00000510906 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
PDPN-209ENST00000510906 M0QZ58 72 aa3.59□□□□□ -1.83
PDPN-209ENST00000510906 PLAC4Q8WY50 150 aa3.59□□□□□ -1.83
PDPN-209ENST00000510906 PRO2289Q9P1D8 64 aa3.59□□□□□ -1.83
PDPN-209ENST00000510906 A6NED7 52 aa3.56□□□□□ -1.84
PDPN-209ENST00000510906 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
PDPN-209ENST00000510906 A0A1B0GU69 56 aa3.55□□□□□ -1.84
PDPN-209ENST00000510906 LINC01554Q52M75 96 aa3.55□□□□□ -1.84
PDPN-209ENST00000510906 CDC42SE1Q9NRR8 79 aa3.54□□□□□ -1.84
PDPN-209ENST00000510906 SPRR2FQ96RM1 72 aa3.53□□□□□ -1.84
PDPN-209ENST00000510906 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
PDPN-209ENST00000510906 UQCR11O14957 56 aa3.49□□□□□ -1.85
PDPN-209ENST00000510906 SPRR2EP22531 72 aa3.48□□□□□ -1.85
PDPN-209ENST00000510906 SPRR2BP35325 72 aa3.48□□□□□ -1.85
PDPN-209ENST00000510906 SPRR2AP35326 72 aa3.48□□□□□ -1.85
PDPN-209ENST00000510906 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
PDPN-209ENST00000510906 SPATA8Q6RVD6 105 aa3.46□□□□□ -1.86
PDPN-209ENST00000510906 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
PDPN-209ENST00000510906 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
PDPN-209ENST00000510906 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
PDPN-209ENST00000510906 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
PDPN-209ENST00000510906 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
PDPN-209ENST00000510906 A0A1B0GU33 70 aa3.39□□□□□ -1.87
PDPN-209ENST00000510906 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
PDPN-209ENST00000510906 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
PDPN-209ENST00000510906 SPRR2DP22532 72 aa3.36□□□□□ -1.87
PDPN-209ENST00000510906 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
PDPN-209ENST00000510906 K7ERS5 55 aa3.32□□□□□ -1.88
PDPN-209ENST00000510906 A0A0D9SG42 100 aa3.28□□□□□ -1.88
PDPN-209ENST00000510906 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
PDPN-209ENST00000510906 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
PDPN-209ENST00000510906 SPINT4Q6UDR6 99 aa3.23□□□□□ -1.89
PDPN-209ENST00000510906 KRTAP12-1P59990 96 aa3.21□□□□□ -1.9
PDPN-209ENST00000510906 MT1EP04732 61 aa3.2□□□□□ -1.9
PDPN-209ENST00000510906 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
PDPN-209ENST00000510906 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
PDPN-209ENST00000510906 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
PDPN-209ENST00000510906 ROMO1P60602 79 aa3.16□□□□□ -1.9
PDPN-209ENST00000510906 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
PDPN-209ENST00000510906 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
PDPN-209ENST00000510906 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
PDPN-209ENST00000510906 MT1GP13640 62 aa3.08□□□□□ -1.92
PDPN-209ENST00000510906 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
PDPN-209ENST00000510906 LCE3AQ5TA76 89 aa3.06□□□□□ -1.92
PDPN-209ENST00000510906 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
PDPN-209ENST00000510906 MT1MQ8N339 61 aa3.05□□□□□ -1.92
PDPN-209ENST00000510906 MT1LQ93083 61 aa3.05□□□□□ -1.92
PDPN-209ENST00000510906 TNP1P09430 55 aa3.04□□□□□ -1.92
PDPN-209ENST00000510906 MT4P47944 62 aa3.04□□□□□ -1.92
PDPN-209ENST00000510906 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
PDPN-209ENST00000510906 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
PDPN-209ENST00000510906 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
PDPN-209ENST00000510906 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
PDPN-209ENST00000510906 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
PDPN-209ENST00000510906 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
PDPN-209ENST00000510906 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
PDPN-209ENST00000510906 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
PDPN-209ENST00000510906 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
PDPN-209ENST00000510906 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
PDPN-209ENST00000510906 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
PDPN-209ENST00000510906 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
PDPN-209ENST00000510906 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
PDPN-209ENST00000510906 MT1AP04731 61 aa2.6□□□□□ -1.99
PDPN-209ENST00000510906 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -1.99
PDPN-209ENST00000510906 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
PDPN-209ENST00000510906 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
PDPN-209ENST00000510906 INE1O15225 51 aa2.24□□□□□ -2.05
PDPN-209ENST00000510906 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
PDPN-209ENST00000510906 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
PDPN-209ENST00000510906 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
PDPN-209ENST00000510906 PRM1P04553 51 aa1.63□□□□□ -2.15
PDPN-209ENST00000510906 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
PDPN-209ENST00000510906 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 32.2 ms