RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 LOC110117498A0A087WWA1 95 aa1.32□□□□□ -2.2
RNF4-211ENST00000509206 K7ERJ3 54 aa1.32□□□□□ -2.2
RNF4-211ENST00000509206 KRTAP19-5Q3LI72 72 aa1.32□□□□□ -2.2
RNF4-211ENST00000509206 GTF2H5Q6ZYL4 71 aa1.32□□□□□ -2.2
RNF4-211ENST00000509206 SPCS1Q9Y6A9 102 aa1.32□□□□□ -2.2
RNF4-211ENST00000509206 F8W1H4 67 aa1.31□□□□□ -2.2
RNF4-211ENST00000509206 KRTAP25-1Q3LHN0 102 aa1.31□□□□□ -2.2
RNF4-211ENST00000509206 KRTAP5-2Q701N4 177 aa1.31□□□□□ -2.2
RNF4-211ENST00000509206 TP53AIP1Q9HCN2 124 aa1.31□□□□□ -2.2
RNF4-211ENST00000509206 C14orf132Q9NPU4 83 aa1.31□□□□□ -2.2
RNF4-211ENST00000509206 K7ERU9 68 aa1.3□□□□□ -2.2
RNF4-211ENST00000509206 MT1LQ93083 61 aa1.3□□□□□ -2.2
RNF4-211ENST00000509206 CYP4F30PQ9H0H9 118 aa1.3□□□□□ -2.2
RNF4-211ENST00000509206 A0A0D9SG42 100 aa1.29□□□□□ -2.2
RNF4-211ENST00000509206 SYNE1Q8NF91 8797 aaKnown RBP1.28□□□□□ -2.2
RNF4-211ENST00000509206 TRAV22A0A0B4J277 110 aa1.28□□□□□ -2.2
RNF4-211ENST00000509206 A0A1B0GU33 70 aa1.28□□□□□ -2.2
RNF4-211ENST00000509206 ATXN8Q156A1 80 aa1.28□□□□□ -2.2
RNF4-211ENST00000509206 ETDBQ3ZM63 59 aa1.28□□□□□ -2.2
RNF4-211ENST00000509206 LOC101927531A0A1B0GV80 90 aa1.27□□□□□ -2.21
RNF4-211ENST00000509206 J3QR89 54 aa1.27□□□□□ -2.21
RNF4-211ENST00000509206 H3BT86 120 aa1.26□□□□□ -2.21
RNF4-211ENST00000509206 SCGB1A1P11684 91 aa1.26□□□□□ -2.21
RNF4-211ENST00000509206 KRTAP5-5Q701N2 237 aaPredicted RBP1.25□□□□□ -2.21
RNF4-211ENST00000509206 LCE1CQ5T751 118 aa1.21□□□□□ -2.22
RNF4-211ENST00000509206 LCE1BQ5T7P3 118 aa1.21□□□□□ -2.22
RNF4-211ENST00000509206 LINC00643Q86TS7 51 aa1.21□□□□□ -2.22
RNF4-211ENST00000509206 CCDC179H3BU77 68 aa1.2□□□□□ -2.22
RNF4-211ENST00000509206 UBL5Q9BZL1 73 aa1.2□□□□□ -2.22
RNF4-211ENST00000509206 C10orf95Q9H7T3 257 aa1.2□□□□□ -2.22
RNF4-211ENST00000509206 ATOX1O00244 68 aa1.19□□□□□ -2.22
RNF4-211ENST00000509206 HIST1H4AP62805 103 aaKnown RBP1.19□□□□□ -2.22
RNF4-211ENST00000509206 H0Y9P7 68 aa1.18□□□□□ -2.22
RNF4-211ENST00000509206 H3BPC8 53 aa1.18□□□□□ -2.22
RNF4-211ENST00000509206 UQCRQO14949 82 aa1.17□□□□□ -2.22
RNF4-211ENST00000509206 COX7CP15954 63 aa1.17□□□□□ -2.22
RNF4-211ENST00000509206 ATP5EP2Q5VTU8 51 aa1.17□□□□□ -2.22
RNF4-211ENST00000509206 SERP2Q8N6R1 65 aa1.16□□□□□ -2.22
RNF4-211ENST00000509206 SPTSSBQ8NFR3 76 aa1.16□□□□□ -2.22
RNF4-211ENST00000509206 RPS28P62857 69 aaKnown RBP1.15□□□□□ -2.23
RNF4-211ENST00000509206 LINC00208Q96KT6 92 aa1.15□□□□□ -2.23
RNF4-211ENST00000509206 TRAV7A0A075B6U4 112 aa1.14□□□□□ -2.23
RNF4-211ENST00000509206 PMAIP1Q13794 54 aa1.14□□□□□ -2.23
RNF4-211ENST00000509206 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
RNF4-211ENST00000509206 SMIM20Q8N5G0 67 aa1.14□□□□□ -2.23
RNF4-211ENST00000509206 H7BZZ5 65 aa1.13□□□□□ -2.23
RNF4-211ENST00000509206 TMEM258P61165 79 aa1.13□□□□□ -2.23
RNF4-211ENST00000509206 TNP1P09430 55 aa1.12□□□□□ -2.23
RNF4-211ENST00000509206 KRTAP12-3P60328 96 aa1.12□□□□□ -2.23
RNF4-211ENST00000509206 KRTAP6-1Q3LI64 71 aa1.12□□□□□ -2.23
RNF4-211ENST00000509206 SNURFQ9Y675 71 aa1.12□□□□□ -2.23
RNF4-211ENST00000509206 CHKB-CPT1BH3BT56 60 aa1.11□□□□□ -2.23
RNF4-211ENST00000509206 MT1AP04731 61 aa1.11□□□□□ -2.23
RNF4-211ENST00000509206 KRTAP13-4Q3LI77 160 aa1.1□□□□□ -2.23
RNF4-211ENST00000509206 DMAC1Q96GE9 116 aa1.1□□□□□ -2.23
RNF4-211ENST00000509206 SERP1Q9Y6X1 66 aa1.1□□□□□ -2.23
RNF4-211ENST00000509206 ACYP2P14621 99 aa1.09□□□□□ -2.23
RNF4-211ENST00000509206 ATP5EP56381 51 aaPredicted RBP1.09□□□□□ -2.23
RNF4-211ENST00000509206 KTN1-AS1Q86SY8 53 aa1.07□□□□□ -2.24
RNF4-211ENST00000509206 Q1T7F1 81 aa1.06□□□□□ -2.24
RNF4-211ENST00000509206 KRTAP12-1P59990 96 aa1.05□□□□□ -2.24
RNF4-211ENST00000509206 SPATA8Q6RVD6 105 aa1.03□□□□□ -2.24
RNF4-211ENST00000509206 COA5Q86WW8 74 aa1.03□□□□□ -2.24
RNF4-211ENST00000509206 LINC01558Q9Y6Z2 57 aa1.02□□□□□ -2.25
RNF4-211ENST00000509206 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
RNF4-211ENST00000509206 BRK1Q8WUW1 75 aa1.01□□□□□ -2.25
RNF4-211ENST00000509206 PRR15LQ9BU68 103 aa1.01□□□□□ -2.25
RNF4-211ENST00000509206 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
RNF4-211ENST00000509206 CDC42SE1Q9NRR8 79 aa0.98□□□□□ -2.25
RNF4-211ENST00000509206 A0A1B0GU69 56 aa0.97□□□□□ -2.25
RNF4-211ENST00000509206 UQCR11O14957 56 aa0.95□□□□□ -2.26
RNF4-211ENST00000509206 MIR22HGQ0VDD5 57 aa0.95□□□□□ -2.26
RNF4-211ENST00000509206 ROMO1P60602 79 aa0.91□□□□□ -2.26
RNF4-211ENST00000509206 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
RNF4-211ENST00000509206 INE1O15225 51 aa0.83□□□□□ -2.28
RNF4-211ENST00000509206 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
RNF4-211ENST00000509206 MUC16Q8WXI7 14507 aa0.52□□□□□ -2.33
RNF4-211ENST00000509206 PRM1P04553 51 aa0.46□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms