RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 P0C880 135 aa4□□□□□ -1.77
SH3D21-206ENST00000508854 KRTAP10-12P60413 245 aa4□□□□□ -1.77
SH3D21-206ENST00000508854 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
SH3D21-206ENST00000508854 CHKB-CPT1BH3BT56 60 aa3.99□□□□□ -1.77
SH3D21-206ENST00000508854 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
SH3D21-206ENST00000508854 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
SH3D21-206ENST00000508854 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
SH3D21-206ENST00000508854 SNURFQ9Y675 71 aa3.92□□□□□ -1.78
SH3D21-206ENST00000508854 A8MU10 97 aa3.88□□□□□ -1.79
SH3D21-206ENST00000508854 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
SH3D21-206ENST00000508854 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
SH3D21-206ENST00000508854 COA5Q86WW8 74 aa3.8□□□□□ -1.8
SH3D21-206ENST00000508854 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
SH3D21-206ENST00000508854 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
SH3D21-206ENST00000508854 PRR15LQ9BU68 103 aa3.74□□□□□ -1.81
SH3D21-206ENST00000508854 MT1EP04732 61 aa3.73□□□□□ -1.81
SH3D21-206ENST00000508854 A0A1B0GU33 70 aa3.72□□□□□ -1.81
SH3D21-206ENST00000508854 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
SH3D21-206ENST00000508854 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
SH3D21-206ENST00000508854 PP632Q6XCG6 107 aa3.69□□□□□ -1.82
SH3D21-206ENST00000508854 MT1GP13640 62 aa3.68□□□□□ -1.82
SH3D21-206ENST00000508854 A0A1B0GU69 56 aa3.67□□□□□ -1.82
SH3D21-206ENST00000508854 MT4P47944 62 aa3.66□□□□□ -1.82
SH3D21-206ENST00000508854 KRTAP25-1Q3LHN0 102 aa3.66□□□□□ -1.82
SH3D21-206ENST00000508854 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.82
SH3D21-206ENST00000508854 KRTAP13-4Q3LI77 160 aa3.65□□□□□ -1.83
SH3D21-206ENST00000508854 LINC01558Q9Y6Z2 57 aa3.65□□□□□ -1.83
SH3D21-206ENST00000508854 A0A0D9SG42 100 aa3.61□□□□□ -1.83
SH3D21-206ENST00000508854 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
SH3D21-206ENST00000508854 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
SH3D21-206ENST00000508854 SPATA8Q6RVD6 105 aa3.58□□□□□ -1.84
SH3D21-206ENST00000508854 SPINT4Q6UDR6 99 aa3.58□□□□□ -1.84
SH3D21-206ENST00000508854 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
SH3D21-206ENST00000508854 MT1MQ8N339 61 aa3.57□□□□□ -1.84
SH3D21-206ENST00000508854 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
SH3D21-206ENST00000508854 UQCR11O14957 56 aa3.54□□□□□ -1.84
SH3D21-206ENST00000508854 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
SH3D21-206ENST00000508854 MT1LQ93083 61 aa3.52□□□□□ -1.85
SH3D21-206ENST00000508854 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
SH3D21-206ENST00000508854 TNP1P09430 55 aa3.47□□□□□ -1.85
SH3D21-206ENST00000508854 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
SH3D21-206ENST00000508854 C10orf95Q9H7T3 257 aa3.42□□□□□ -1.86
SH3D21-206ENST00000508854 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
SH3D21-206ENST00000508854 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
SH3D21-206ENST00000508854 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
SH3D21-206ENST00000508854 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
SH3D21-206ENST00000508854 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
SH3D21-206ENST00000508854 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
SH3D21-206ENST00000508854 INE1O15225 51 aa3.25□□□□□ -1.89
SH3D21-206ENST00000508854 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
SH3D21-206ENST00000508854 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
SH3D21-206ENST00000508854 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
SH3D21-206ENST00000508854 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
SH3D21-206ENST00000508854 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
SH3D21-206ENST00000508854 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
SH3D21-206ENST00000508854 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
SH3D21-206ENST00000508854 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
SH3D21-206ENST00000508854 MT1AP04731 61 aa3.01□□□□□ -1.93
SH3D21-206ENST00000508854 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
SH3D21-206ENST00000508854 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
SH3D21-206ENST00000508854 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
SH3D21-206ENST00000508854 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
SH3D21-206ENST00000508854 MT3P25713 68 aa2.8□□□□□ -1.96
SH3D21-206ENST00000508854 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
SH3D21-206ENST00000508854 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
SH3D21-206ENST00000508854 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
SH3D21-206ENST00000508854 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
SH3D21-206ENST00000508854 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
SH3D21-206ENST00000508854 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
SH3D21-206ENST00000508854 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
SH3D21-206ENST00000508854 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
SH3D21-206ENST00000508854 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
SH3D21-206ENST00000508854 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
SH3D21-206ENST00000508854 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SH3D21-206ENST00000508854 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
SH3D21-206ENST00000508854 PRM1P04553 51 aa1.65□□□□□ -2.15
SH3D21-206ENST00000508854 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
SH3D21-206ENST00000508854 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 1020 ms