RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 TNP1P09430 55 aa3.88□□□□□ -1.79
PTPN20-220ENST00000508715 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
PTPN20-220ENST00000508715 CDC42SE1Q9NRR8 79 aa3.87□□□□□ -1.79
PTPN20-220ENST00000508715 SPRR2EP22531 72 aa3.85□□□□□ -1.79
PTPN20-220ENST00000508715 SPRR2BP35325 72 aa3.85□□□□□ -1.79
PTPN20-220ENST00000508715 SPRR2AP35326 72 aa3.85□□□□□ -1.79
PTPN20-220ENST00000508715 K7ERS5 55 aa3.84□□□□□ -1.79
PTPN20-220ENST00000508715 MT1EP04732 61 aa3.84□□□□□ -1.79
PTPN20-220ENST00000508715 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
PTPN20-220ENST00000508715 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
PTPN20-220ENST00000508715 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
PTPN20-220ENST00000508715 ROMO1P60602 79 aa3.72□□□□□ -1.81
PTPN20-220ENST00000508715 SPRR2DP22532 72 aa3.71□□□□□ -1.82
PTPN20-220ENST00000508715 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
PTPN20-220ENST00000508715 MT1LQ93083 61 aa3.71□□□□□ -1.82
PTPN20-220ENST00000508715 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
PTPN20-220ENST00000508715 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
PTPN20-220ENST00000508715 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
PTPN20-220ENST00000508715 BRK1Q8WUW1 75 aa3.67□□□□□ -1.82
PTPN20-220ENST00000508715 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
PTPN20-220ENST00000508715 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
PTPN20-220ENST00000508715 MT1GP13640 62 aa3.66□□□□□ -1.82
PTPN20-220ENST00000508715 MT1MQ8N339 61 aa3.64□□□□□ -1.83
PTPN20-220ENST00000508715 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
PTPN20-220ENST00000508715 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
PTPN20-220ENST00000508715 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
PTPN20-220ENST00000508715 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
PTPN20-220ENST00000508715 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
PTPN20-220ENST00000508715 KRTAP15-1Q3LI76 137 aa3.52□□□□□ -1.85
PTPN20-220ENST00000508715 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
PTPN20-220ENST00000508715 PMAIP1Q13794 54 aa3.46□□□□□ -1.86
PTPN20-220ENST00000508715 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
PTPN20-220ENST00000508715 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
PTPN20-220ENST00000508715 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
PTPN20-220ENST00000508715 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
PTPN20-220ENST00000508715 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
PTPN20-220ENST00000508715 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
PTPN20-220ENST00000508715 MT4P47944 62 aa3.25□□□□□ -1.89
PTPN20-220ENST00000508715 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
PTPN20-220ENST00000508715 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
PTPN20-220ENST00000508715 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
PTPN20-220ENST00000508715 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
PTPN20-220ENST00000508715 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
PTPN20-220ENST00000508715 MT1AP04731 61 aa3.15□□□□□ -1.91
PTPN20-220ENST00000508715 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
PTPN20-220ENST00000508715 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
PTPN20-220ENST00000508715 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
PTPN20-220ENST00000508715 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
PTPN20-220ENST00000508715 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
PTPN20-220ENST00000508715 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
PTPN20-220ENST00000508715 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
PTPN20-220ENST00000508715 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
PTPN20-220ENST00000508715 SVIPQ8NHG7 77 aa2.98□□□□□ -1.93
PTPN20-220ENST00000508715 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
PTPN20-220ENST00000508715 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
PTPN20-220ENST00000508715 MT3P25713 68 aa2.83□□□□□ -1.96
PTPN20-220ENST00000508715 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
PTPN20-220ENST00000508715 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
PTPN20-220ENST00000508715 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
PTPN20-220ENST00000508715 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
PTPN20-220ENST00000508715 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
PTPN20-220ENST00000508715 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
PTPN20-220ENST00000508715 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
PTPN20-220ENST00000508715 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
PTPN20-220ENST00000508715 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
PTPN20-220ENST00000508715 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
PTPN20-220ENST00000508715 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
PTPN20-220ENST00000508715 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
PTPN20-220ENST00000508715 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
PTPN20-220ENST00000508715 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
PTPN20-220ENST00000508715 A0A0A0MQY5 61 aa2.07□□□□□ -2.08
PTPN20-220ENST00000508715 PRM1P04553 51 aa1.94□□□□□ -2.1
PTPN20-220ENST00000508715 INE1O15225 51 aa1.93□□□□□ -2.1
PTPN20-220ENST00000508715 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
PTPN20-220ENST00000508715 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
PTPN20-220ENST00000508715 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
PTPN20-220ENST00000508715 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 40.6 ms