RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 CFAP54Q96N23 3096 aa-0.92□□□□□ -2.56
SMN2-208ENST00000508258 TLN1Q9Y490 2541 aaKnown RBP-0.94□□□□□ -2.56
SMN2-208ENST00000508258 MT1BP07438 61 aa-0.95□□□□□ -2.56
SMN2-208ENST00000508258 FREM2Q5SZK8 3169 aa-0.96□□□□□ -2.56
SMN2-208ENST00000508258 IQGAP2Q13576 1575 aa-0.96□□□□□ -2.56
SMN2-208ENST00000508258 ABCA13Q86UQ4 5058 aa-0.96□□□□□ -2.56
SMN2-208ENST00000508258 ATMQ13315 3056 aa-0.97□□□□□ -2.56
SMN2-208ENST00000508258 FRYLO94915 3013 aa-0.99□□□□□ -2.57
SMN2-208ENST00000508258 WDFY3Q8IZQ1 3526 aa-1□□□□□ -2.57
SMN2-208ENST00000508258 PCNTO95613 3336 aa-1.01□□□□□ -2.57
SMN2-208ENST00000508258 DMDP11532 3685 aa-1.01□□□□□ -2.57
SMN2-208ENST00000508258 ATP7AQ04656 1500 aa-1.02□□□□□ -2.57
SMN2-208ENST00000508258 SAMD9LQ8IVG5 1584 aa-1.02□□□□□ -2.57
SMN2-208ENST00000508258 SZT2Q5T011 3432 aa-1.02□□□□□ -2.57
SMN2-208ENST00000508258 RPS29P62273 56 aaKnown RBP-1.03□□□□□ -2.57
SMN2-208ENST00000508258 TOMM7Q9P0U1 55 aa-1.04□□□□□ -2.58
SMN2-208ENST00000508258 WDFY4Q6ZS81 3184 aa-1.05□□□□□ -2.58
SMN2-208ENST00000508258 TOMM5Q8N4H5 51 aa-1.06□□□□□ -2.58
SMN2-208ENST00000508258 DUOX1Q9NRD9 1551 aa-1.06□□□□□ -2.58
SMN2-208ENST00000508258 CEP250Q9BV73 2442 aa-1.07□□□□□ -2.58
SMN2-208ENST00000508258 CEP350Q5VT06 3117 aa-1.07□□□□□ -2.58
SMN2-208ENST00000508258 LINC01590Q5TEZ4 76 aa-1.07□□□□□ -2.58
SMN2-208ENST00000508258 MUC3AQ02505 3323 aa-1.08□□□□□ -2.58
SMN2-208ENST00000508258 RPL39P62891 51 aaKnown RBP-1.08□□□□□ -2.58
SMN2-208ENST00000508258 BOD1L1Q8NFC6 3051 aa-1.09□□□□□ -2.58
SMN2-208ENST00000508258 SPEGQ15772 3267 aa-1.11□□□□□ -2.59
SMN2-208ENST00000508258 MT1FP04733 61 aa-1.11□□□□□ -2.59
SMN2-208ENST00000508258 XIRP2A4UGR9 3374 aa-1.12□□□□□ -2.59
SMN2-208ENST00000508258 RHPN1-AS1Q9BWJ2 59 aa-1.13□□□□□ -2.59
SMN2-208ENST00000508258 MROH2BQ7Z745 1585 aa-1.14□□□□□ -2.59
SMN2-208ENST00000508258 KRTAP20-1Q3LI63 56 aa-1.15□□□□□ -2.59
SMN2-208ENST00000508258 RPL39LQ96EH5 51 aaKnown RBP-1.15□□□□□ -2.59
SMN2-208ENST00000508258 TOP2AP11388 1531 aaKnown RBP-1.16□□□□□ -2.6
SMN2-208ENST00000508258 DNAH12Q6ZR08 3092 aa-1.17□□□□□ -2.6
SMN2-208ENST00000508258 EP400Q96L91 3159 aa-1.18□□□□□ -2.6
SMN2-208ENST00000508258 MKI67P46013 3256 aaKnown RBP-1.2□□□□□ -2.6
SMN2-208ENST00000508258 DCHS1Q96JQ0 3298 aa-1.2□□□□□ -2.6
SMN2-208ENST00000508258 DEFB133Q30KQ1 61 aa-1.2□□□□□ -2.6
SMN2-208ENST00000508258 A0A096LNI7 61 aa-1.21□□□□□ -2.6
SMN2-208ENST00000508258 HTN1P15515 57 aa-1.25□□□□□ -2.61
SMN2-208ENST00000508258 DEFB124Q8NES8 71 aa-1.25□□□□□ -2.61
SMN2-208ENST00000508258 LOC400499M0QZD8 3231 aa-1.27□□□□□ -2.61
SMN2-208ENST00000508258 USP34Q70CQ2 3546 aa-1.27□□□□□ -2.61
SMN2-208ENST00000508258 CENPEQ02224 2701 aa-1.27□□□□□ -2.61
SMN2-208ENST00000508258 ASPMQ8IZT6 3477 aa-1.28□□□□□ -2.61
SMN2-208ENST00000508258 DEFB104AQ8WTQ1 72 aa-1.28□□□□□ -2.61
SMN2-208ENST00000508258 TTTY10Q9BZA0 68 aa-1.28□□□□□ -2.61
SMN2-208ENST00000508258 UNC80Q8N2C7 3258 aa-1.31□□□□□ -2.62
SMN2-208ENST00000508258 CD52P31358 61 aa-1.32□□□□□ -2.62
SMN2-208ENST00000508258 CFAP47Q6ZTR5 3102 aa-1.32□□□□□ -2.62
SMN2-208ENST00000508258 DNAH14Q0VDD8 3507 aa-1.33□□□□□ -2.62
SMN2-208ENST00000508258 GCC2Q8IWJ2 1684 aa-1.35□□□□□ -2.63
SMN2-208ENST00000508258 BRCA2P51587 3418 aa-1.37□□□□□ -2.63
SMN2-208ENST00000508258 KRTAP19-6Q3LI70 58 aa-1.37□□□□□ -2.63
SMN2-208ENST00000508258 H3BUX3 64 aa-1.38□□□□□ -2.63
SMN2-208ENST00000508258 SNRPGP62308 76 aaKnown RBP-1.39□□□□□ -2.63
SMN2-208ENST00000508258 KRTAP19-2Q3LHN2 52 aa-1.39□□□□□ -2.63
SMN2-208ENST00000508258 K7EIM0 57 aa-1.4□□□□□ -2.63
SMN2-208ENST00000508258 VCANP13611 3396 aa-1.44□□□□□ -2.64
SMN2-208ENST00000508258 ARHGAP5-AS1Q96IT6 56 aa-1.47□□□□□ -2.64
SMN2-208ENST00000508258 PRCDQ00LT1 54 aa-1.48□□□□□ -2.65
SMN2-208ENST00000508258 LINC01556Q5JQF7 62 aa-1.49□□□□□ -2.65
SMN2-208ENST00000508258 CENPFP49454 3210 aa-1.5□□□□□ -2.65
SMN2-208ENST00000508258 CDH23Q9H251 3354 aa-1.55□□□□□ -2.66
SMN2-208ENST00000508258 VPS13AQ96RL7 3174 aa-1.58□□□□□ -2.66
SMN2-208ENST00000508258 TMEM167AQ8TBQ9 72 aa-1.59□□□□□ -2.66
SMN2-208ENST00000508258 A0A096LPF7 62 aa-1.65□□□□□ -2.67
SMN2-208ENST00000508258 APELAP0DMC3 54 aa-1.65□□□□□ -2.67
SMN2-208ENST00000508258 UTRNP46939 3433 aa-1.67□□□□□ -2.68
SMN2-208ENST00000508258 RPL39P5Q59GN2 51 aa-1.68□□□□□ -2.68
SMN2-208ENST00000508258 H3BSH0 61 aa-1.69□□□□□ -2.68
SMN2-208ENST00000508258 DEFB108AA8MXU0 73 aa-1.75□□□□□ -2.69
SMN2-208ENST00000508258 HTN3P15516 51 aa-1.83□□□□□ -2.7
SMN2-208ENST00000508258 Q9Y3F1 56 aa-1.83□□□□□ -2.7
SMN2-208ENST00000508258 GOLGB1Q14789 3259 aaKnown RBP-1.83□□□□□ -2.7
SMN2-208ENST00000508258 COX14Q96I36 57 aa-2.02□□□□□ -2.73
SMN2-208ENST00000508258 DEFB108BQ8NET1 73 aa-2.05□□□□□ -2.74
SMN2-208ENST00000508258 STATHP02808 62 aa-2.31□□□□□ -2.78
Retrieved 78 of 20,778 RNA–protein pairs in 37.2 ms