RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
NR1I3-224ENST00000507215 C14orf132Q9NPU4 83 aa2.76□□□□□ -1.97
NR1I3-224ENST00000507215 SERP2Q8N6R1 65 aa2.73□□□□□ -1.97
NR1I3-224ENST00000507215 SPANXA2-OT1Q8N9U9 137 aa2.73□□□□□ -1.97
NR1I3-224ENST00000507215 TP53AIP1Q9HCN2 124 aa2.73□□□□□ -1.97
NR1I3-224ENST00000507215 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
NR1I3-224ENST00000507215 NDUFC1O43677 76 aa2.72□□□□□ -1.97
NR1I3-224ENST00000507215 CYSTM1Q9H1C7 97 aa2.7□□□□□ -1.98
NR1I3-224ENST00000507215 TRAV7A0A075B6U4 112 aa2.69□□□□□ -1.98
NR1I3-224ENST00000507215 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
NR1I3-224ENST00000507215 C20orf197Q8N268 126 aa2.69□□□□□ -1.98
NR1I3-224ENST00000507215 H3BPC8 53 aa2.68□□□□□ -1.98
NR1I3-224ENST00000507215 ATP5EP56381 51 aaPredicted RBP2.67□□□□□ -1.98
NR1I3-224ENST00000507215 ROMO1P60602 79 aa2.67□□□□□ -1.98
NR1I3-224ENST00000507215 ATP5EP2Q5VTU8 51 aa2.67□□□□□ -1.98
NR1I3-224ENST00000507215 R4GN34 69 aa2.67□□□□□ -1.98
NR1I3-224ENST00000507215 A0A087WVE0 104 aa2.65□□□□□ -1.99
NR1I3-224ENST00000507215 CYP4F30PQ9H0H9 118 aa2.65□□□□□ -1.99
NR1I3-224ENST00000507215 LOC101927531A0A1B0GV80 90 aa2.64□□□□□ -1.99
NR1I3-224ENST00000507215 UBL5Q9BZL1 73 aa2.64□□□□□ -1.99
NR1I3-224ENST00000507215 H7BZZ5 65 aa2.63□□□□□ -1.99
NR1I3-224ENST00000507215 TRAV22A0A0B4J277 110 aa2.62□□□□□ -1.99
NR1I3-224ENST00000507215 A0A1B0GU33 70 aa2.62□□□□□ -1.99
NR1I3-224ENST00000507215 M0QZ58 72 aa2.6□□□□□ -1.99
NR1I3-224ENST00000507215 Q1T7F1 81 aa2.59□□□□□ -1.99
NR1I3-224ENST00000507215 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
NR1I3-224ENST00000507215 SNURFQ9Y675 71 aa2.58□□□□□ -2
NR1I3-224ENST00000507215 KRTAP25-1Q3LHN0 102 aa2.57□□□□□ -2
NR1I3-224ENST00000507215 P0C880 135 aa2.55□□□□□ -2
NR1I3-224ENST00000507215 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
NR1I3-224ENST00000507215 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
NR1I3-224ENST00000507215 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
NR1I3-224ENST00000507215 MIR22HGQ0VDD5 57 aa2.53□□□□□ -2
NR1I3-224ENST00000507215 SPTSSBQ8NFR3 76 aa2.53□□□□□ -2
NR1I3-224ENST00000507215 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
NR1I3-224ENST00000507215 CDC42SE1Q9NRR8 79 aa2.5□□□□□ -2.01
NR1I3-224ENST00000507215 MT4P47944 62 aa2.49□□□□□ -2.01
NR1I3-224ENST00000507215 H0Y9P7 68 aa2.48□□□□□ -2.01
NR1I3-224ENST00000507215 MT1EP04732 61 aa2.48□□□□□ -2.01
NR1I3-224ENST00000507215 MT1GP13640 62 aa2.48□□□□□ -2.01
NR1I3-224ENST00000507215 SPINT4Q6UDR6 99 aa2.48□□□□□ -2.01
NR1I3-224ENST00000507215 KRTAP19-7Q3SYF9 63 aa2.47□□□□□ -2.01
NR1I3-224ENST00000507215 CHKB-CPT1BH3BT56 60 aa2.43□□□□□ -2.02
NR1I3-224ENST00000507215 DMAC1Q96GE9 116 aa2.42□□□□□ -2.02
NR1I3-224ENST00000507215 PRR15LQ9BU68 103 aa2.42□□□□□ -2.02
NR1I3-224ENST00000507215 LINC00208Q96KT6 92 aa2.41□□□□□ -2.02
NR1I3-224ENST00000507215 MT1MQ8N339 61 aa2.38□□□□□ -2.03
NR1I3-224ENST00000507215 LINC01558Q9Y6Z2 57 aa2.37□□□□□ -2.03
NR1I3-224ENST00000507215 COA5Q86WW8 74 aa2.35□□□□□ -2.03
NR1I3-224ENST00000507215 A0A0D9SG42 100 aa2.33□□□□□ -2.04
NR1I3-224ENST00000507215 ACYP2P14621 99 aa2.33□□□□□ -2.04
NR1I3-224ENST00000507215 KRTAP19-5Q3LI72 72 aa2.33□□□□□ -2.04
NR1I3-224ENST00000507215 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
NR1I3-224ENST00000507215 MT1LQ93083 61 aa2.32□□□□□ -2.04
NR1I3-224ENST00000507215 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
NR1I3-224ENST00000507215 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
NR1I3-224ENST00000507215 SPATA8Q6RVD6 105 aa2.26□□□□□ -2.05
NR1I3-224ENST00000507215 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
NR1I3-224ENST00000507215 KRTAP13-4Q3LI77 160 aa2.23□□□□□ -2.05
NR1I3-224ENST00000507215 C10orf95Q9H7T3 257 aa2.23□□□□□ -2.05
NR1I3-224ENST00000507215 A0A1B0GU69 56 aa2.21□□□□□ -2.06
NR1I3-224ENST00000507215 UQCR11O14957 56 aa2.2□□□□□ -2.06
NR1I3-224ENST00000507215 INE1O15225 51 aa2.19□□□□□ -2.06
NR1I3-224ENST00000507215 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
NR1I3-224ENST00000507215 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
NR1I3-224ENST00000507215 TNP1P09430 55 aa2.17□□□□□ -2.06
NR1I3-224ENST00000507215 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
NR1I3-224ENST00000507215 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
NR1I3-224ENST00000507215 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
NR1I3-224ENST00000507215 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
NR1I3-224ENST00000507215 MT1AP04731 61 aa2□□□□□ -2.09
NR1I3-224ENST00000507215 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
NR1I3-224ENST00000507215 KRTAP6-1Q3LI64 71 aa1.95□□□□□ -2.1
NR1I3-224ENST00000507215 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
NR1I3-224ENST00000507215 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
NR1I3-224ENST00000507215 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
NR1I3-224ENST00000507215 PRM1P04553 51 aa1.09□□□□□ -2.23
NR1I3-224ENST00000507215 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 145.2 ms