RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 NEBP20929 6669 aa3.32□□□□□ -1.88
COL4A5-208ENST00000505728 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
COL4A5-208ENST00000505728 MT1XP80297 61 aa3.31□□□□□ -1.88
COL4A5-208ENST00000505728 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
COL4A5-208ENST00000505728 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
COL4A5-208ENST00000505728 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
COL4A5-208ENST00000505728 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
COL4A5-208ENST00000505728 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
COL4A5-208ENST00000505728 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
COL4A5-208ENST00000505728 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
COL4A5-208ENST00000505728 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
COL4A5-208ENST00000505728 KMT2DO14686 5537 aa3.12□□□□□ -1.91
COL4A5-208ENST00000505728 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
COL4A5-208ENST00000505728 KRTAP12-3P60328 96 aa3.06□□□□□ -1.92
COL4A5-208ENST00000505728 KRTAP15-1Q3LI76 137 aa3.06□□□□□ -1.92
COL4A5-208ENST00000505728 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
COL4A5-208ENST00000505728 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
COL4A5-208ENST00000505728 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
COL4A5-208ENST00000505728 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
COL4A5-208ENST00000505728 SPRR2EP22531 72 aa2.98□□□□□ -1.93
COL4A5-208ENST00000505728 SPRR2BP35325 72 aa2.98□□□□□ -1.93
COL4A5-208ENST00000505728 SPRR2AP35326 72 aa2.98□□□□□ -1.93
COL4A5-208ENST00000505728 KRTAP19-7Q3SYF9 63 aa2.95□□□□□ -1.94
COL4A5-208ENST00000505728 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
COL4A5-208ENST00000505728 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
COL4A5-208ENST00000505728 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
COL4A5-208ENST00000505728 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
COL4A5-208ENST00000505728 MT1EP04732 61 aa2.9□□□□□ -1.95
COL4A5-208ENST00000505728 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
COL4A5-208ENST00000505728 SPRR2DP22532 72 aa2.88□□□□□ -1.95
COL4A5-208ENST00000505728 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
COL4A5-208ENST00000505728 MT1LQ93083 61 aa2.86□□□□□ -1.95
COL4A5-208ENST00000505728 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
COL4A5-208ENST00000505728 MT1GP13640 62 aa2.79□□□□□ -1.96
COL4A5-208ENST00000505728 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.96
COL4A5-208ENST00000505728 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
COL4A5-208ENST00000505728 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
COL4A5-208ENST00000505728 MT1MQ8N339 61 aa2.73□□□□□ -1.97
COL4A5-208ENST00000505728 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
COL4A5-208ENST00000505728 KRTAP4-3Q9BYR4 195 aa2.64□□□□□ -1.99
COL4A5-208ENST00000505728 HMCN1Q96RW7 5635 aa2.59□□□□□ -2
COL4A5-208ENST00000505728 A0A0A0MQY5 61 aa2.57□□□□□ -2
COL4A5-208ENST00000505728 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
COL4A5-208ENST00000505728 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
COL4A5-208ENST00000505728 MT4P47944 62 aa2.54□□□□□ -2
COL4A5-208ENST00000505728 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
COL4A5-208ENST00000505728 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
COL4A5-208ENST00000505728 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
COL4A5-208ENST00000505728 MT1AP04731 61 aa2.45□□□□□ -2.02
COL4A5-208ENST00000505728 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
COL4A5-208ENST00000505728 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
COL4A5-208ENST00000505728 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
COL4A5-208ENST00000505728 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
COL4A5-208ENST00000505728 INE1O15225 51 aa2.38□□□□□ -2.03
COL4A5-208ENST00000505728 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
COL4A5-208ENST00000505728 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
COL4A5-208ENST00000505728 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
COL4A5-208ENST00000505728 MT3P25713 68 aa2.28□□□□□ -2.04
COL4A5-208ENST00000505728 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
COL4A5-208ENST00000505728 KRTAP6-2Q3LI66 62 aa2.19□□□□□ -2.06
COL4A5-208ENST00000505728 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
COL4A5-208ENST00000505728 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
COL4A5-208ENST00000505728 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
COL4A5-208ENST00000505728 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
COL4A5-208ENST00000505728 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
COL4A5-208ENST00000505728 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
COL4A5-208ENST00000505728 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
COL4A5-208ENST00000505728 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
COL4A5-208ENST00000505728 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
COL4A5-208ENST00000505728 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
COL4A5-208ENST00000505728 PRM1P04553 51 aa1.85□□□□□ -2.11
COL4A5-208ENST00000505728 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
COL4A5-208ENST00000505728 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
COL4A5-208ENST00000505728 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
COL4A5-208ENST00000505728 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
COL4A5-208ENST00000505728 MUC19Q7Z5P9 8384 aa1.34□□□□□ -2.19
COL4A5-208ENST00000505728 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
COL4A5-208ENST00000505728 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 237.3 ms