RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 MRPL34Q9BQ48 92 aaKnown RBP2.77□□□□□ -1.97
VCAN-206ENST00000505615 SPCS1Q9Y6A9 102 aa2.75□□□□□ -1.97
VCAN-206ENST00000505615 A8MU10 97 aa2.74□□□□□ -1.97
VCAN-206ENST00000505615 PRO1854Q9UHT4 67 aa2.73□□□□□ -1.97
VCAN-206ENST00000505615 K7EQZ3 153 aa2.72□□□□□ -1.97
VCAN-206ENST00000505615 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
VCAN-206ENST00000505615 A0A1W2PPM0 123 aa2.71□□□□□ -1.98
VCAN-206ENST00000505615 JMJD7-PLA2G4BH0Y9G9 81 aa2.71□□□□□ -1.98
VCAN-206ENST00000505615 DNAL4O96015 105 aa2.71□□□□□ -1.98
VCAN-206ENST00000505615 ETDBQ3ZM63 59 aa2.71□□□□□ -1.98
VCAN-206ENST00000505615 PLAC4Q8WY50 150 aa2.71□□□□□ -1.98
VCAN-206ENST00000505615 COX6CP09669 75 aa2.7□□□□□ -1.98
VCAN-206ENST00000505615 CHKB-CPT1BH3BT56 60 aa2.69□□□□□ -1.98
VCAN-206ENST00000505615 PDE6GP18545 87 aa2.69□□□□□ -1.98
VCAN-206ENST00000505615 TRAV22A0A0B4J277 110 aa2.68□□□□□ -1.98
VCAN-206ENST00000505615 H7BZZ5 65 aa2.68□□□□□ -1.98
VCAN-206ENST00000505615 CYSTM1Q9H1C7 97 aa2.68□□□□□ -1.98
VCAN-206ENST00000505615 A0A087WVE0 104 aa2.67□□□□□ -1.98
VCAN-206ENST00000505615 HIGD1BQ9P298 99 aa2.67□□□□□ -1.98
VCAN-206ENST00000505615 H0YAA0 97 aa2.66□□□□□ -1.98
VCAN-206ENST00000505615 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
VCAN-206ENST00000505615 COX8AP10176 69 aa2.65□□□□□ -1.99
VCAN-206ENST00000505615 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
VCAN-206ENST00000505615 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
VCAN-206ENST00000505615 C20orf197Q8N268 126 aa2.65□□□□□ -1.99
VCAN-206ENST00000505615 ACYP1P07311 99 aa2.64□□□□□ -1.99
VCAN-206ENST00000505615 COA5Q86WW8 74 aa2.64□□□□□ -1.99
VCAN-206ENST00000505615 KRTAP19-7Q3SYF9 63 aa2.63□□□□□ -1.99
VCAN-206ENST00000505615 PRO0461Q9UI25 63 aa2.63□□□□□ -1.99
VCAN-206ENST00000505615 MT1EP04732 61 aa2.62□□□□□ -1.99
VCAN-206ENST00000505615 LINC00643Q86TS7 51 aa2.62□□□□□ -1.99
VCAN-206ENST00000505615 LOC101927531A0A1B0GV80 90 aa2.61□□□□□ -1.99
VCAN-206ENST00000505615 INE1O15225 51 aa2.61□□□□□ -1.99
VCAN-206ENST00000505615 SPATA45Q537H7 98 aa2.61□□□□□ -1.99
VCAN-206ENST00000505615 LOC110117498A0A087WWA1 95 aa2.6□□□□□ -1.99
VCAN-206ENST00000505615 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
VCAN-206ENST00000505615 NREPQ16612 68 aa2.59□□□□□ -1.99
VCAN-206ENST00000505615 SNURFQ9Y675 71 aa2.57□□□□□ -2
VCAN-206ENST00000505615 MT1GP13640 62 aa2.54□□□□□ -2
VCAN-206ENST00000505615 M0QZ58 72 aa2.53□□□□□ -2
VCAN-206ENST00000505615 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
VCAN-206ENST00000505615 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
VCAN-206ENST00000505615 MT1MQ8N339 61 aa2.52□□□□□ -2.01
VCAN-206ENST00000505615 LINC00208Q96KT6 92 aa2.5□□□□□ -2.01
VCAN-206ENST00000505615 LINC01558Q9Y6Z2 57 aa2.5□□□□□ -2.01
VCAN-206ENST00000505615 UQCR11O14957 56 aa2.49□□□□□ -2.01
VCAN-206ENST00000505615 PP632Q6XCG6 107 aa2.49□□□□□ -2.01
VCAN-206ENST00000505615 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
VCAN-206ENST00000505615 PRR15LQ9BU68 103 aa2.48□□□□□ -2.01
VCAN-206ENST00000505615 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
VCAN-206ENST00000505615 ATXN8Q156A1 80 aa2.44□□□□□ -2.02
VCAN-206ENST00000505615 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
VCAN-206ENST00000505615 MT1LQ93083 61 aa2.43□□□□□ -2.02
VCAN-206ENST00000505615 TP53AIP1Q9HCN2 124 aa2.42□□□□□ -2.02
VCAN-206ENST00000505615 ACYP2P14621 99 aa2.41□□□□□ -2.02
VCAN-206ENST00000505615 KRTAP13-4Q3LI77 160 aa2.39□□□□□ -2.03
VCAN-206ENST00000505615 ATP5EP2Q5VTU8 51 aa2.39□□□□□ -2.03
VCAN-206ENST00000505615 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
VCAN-206ENST00000505615 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
VCAN-206ENST00000505615 H0Y9P7 68 aa2.33□□□□□ -2.04
VCAN-206ENST00000505615 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
VCAN-206ENST00000505615 SPATA8Q6RVD6 105 aa2.32□□□□□ -2.04
VCAN-206ENST00000505615 A0A0D9SG42 100 aa2.31□□□□□ -2.04
VCAN-206ENST00000505615 UBL5Q9BZL1 73 aa2.28□□□□□ -2.04
VCAN-206ENST00000505615 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
VCAN-206ENST00000505615 A0A1B0GU69 56 aa2.21□□□□□ -2.06
VCAN-206ENST00000505615 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
VCAN-206ENST00000505615 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
VCAN-206ENST00000505615 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
VCAN-206ENST00000505615 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
VCAN-206ENST00000505615 MT1AP04731 61 aa2.06□□□□□ -2.08
VCAN-206ENST00000505615 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
VCAN-206ENST00000505615 TNP1P09430 55 aa1.99□□□□□ -2.09
VCAN-206ENST00000505615 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
VCAN-206ENST00000505615 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
VCAN-206ENST00000505615 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
VCAN-206ENST00000505615 PRM1P04553 51 aa1.05□□□□□ -2.24
VCAN-206ENST00000505615 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 32.9 ms