RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
SNX25-202ENST00000504273 PP632Q6XCG6 107 aa2.9□□□□□ -1.95
SNX25-202ENST00000504273 TNP1P09430 55 aa2.89□□□□□ -1.95
SNX25-202ENST00000504273 KRTAP10-5P60370 271 aa2.88□□□□□ -1.95
SNX25-202ENST00000504273 KRTAP4-8Q9BYQ9 185 aa2.88□□□□□ -1.95
SNX25-202ENST00000504273 MT1XP80297 61 aa2.87□□□□□ -1.95
SNX25-202ENST00000504273 MUC12Q9UKN1 5478 aa2.87□□□□□ -1.95
SNX25-202ENST00000504273 LCE3BQ5TA77 95 aa2.86□□□□□ -1.95
SNX25-202ENST00000504273 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
SNX25-202ENST00000504273 KMT2DO14686 5537 aa2.83□□□□□ -1.96
SNX25-202ENST00000504273 SPRR2EP22531 72 aa2.8□□□□□ -1.96
SNX25-202ENST00000504273 SPRR2BP35325 72 aa2.8□□□□□ -1.96
SNX25-202ENST00000504273 SPRR2AP35326 72 aa2.8□□□□□ -1.96
SNX25-202ENST00000504273 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
SNX25-202ENST00000504273 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
SNX25-202ENST00000504273 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
SNX25-202ENST00000504273 KRTAP8-1Q8IUC2 63 aa2.76□□□□□ -1.97
SNX25-202ENST00000504273 INE1O15225 51 aa2.75□□□□□ -1.97
SNX25-202ENST00000504273 SPRR2DP22532 72 aa2.74□□□□□ -1.97
SNX25-202ENST00000504273 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
SNX25-202ENST00000504273 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.97
SNX25-202ENST00000504273 KRTAP10-12P60413 245 aa2.71□□□□□ -1.98
SNX25-202ENST00000504273 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
SNX25-202ENST00000504273 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
SNX25-202ENST00000504273 SPRR2FQ96RM1 72 aa2.67□□□□□ -1.98
SNX25-202ENST00000504273 KRTAP4-8A0A0G2JLE6 195 aa2.64□□□□□ -1.99
SNX25-202ENST00000504273 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
SNX25-202ENST00000504273 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
SNX25-202ENST00000504273 LCE1DQ5T752 114 aa2.6□□□□□ -1.99
SNX25-202ENST00000504273 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
SNX25-202ENST00000504273 LCE1FQ5T754 118 aa2.57□□□□□ -2
SNX25-202ENST00000504273 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
SNX25-202ENST00000504273 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
SNX25-202ENST00000504273 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
SNX25-202ENST00000504273 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
SNX25-202ENST00000504273 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
SNX25-202ENST00000504273 KRTAP4-7Q9BYR0 210 aa2.5□□□□□ -2.01
SNX25-202ENST00000504273 MT1EP04732 61 aa2.48□□□□□ -2.01
SNX25-202ENST00000504273 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
SNX25-202ENST00000504273 MT1LQ93083 61 aa2.47□□□□□ -2.01
SNX25-202ENST00000504273 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
SNX25-202ENST00000504273 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
SNX25-202ENST00000504273 KRTAP4-3Q9BYR4 195 aa2.37□□□□□ -2.03
SNX25-202ENST00000504273 KRTAP4-2Q9BYR5 136 aa2.35□□□□□ -2.03
SNX25-202ENST00000504273 DSTQ03001 7570 aaKnown RBP2.35□□□□□ -2.03
SNX25-202ENST00000504273 MT4P47944 62 aa2.34□□□□□ -2.03
SNX25-202ENST00000504273 MT3P25713 68 aa2.32□□□□□ -2.04
SNX25-202ENST00000504273 MT1MQ8N339 61 aa2.32□□□□□ -2.04
SNX25-202ENST00000504273 KRTAP19-3Q7Z4W3 81 aa2.31□□□□□ -2.04
SNX25-202ENST00000504273 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
SNX25-202ENST00000504273 MT1GP13640 62 aa2.29□□□□□ -2.04
SNX25-202ENST00000504273 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
SNX25-202ENST00000504273 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
SNX25-202ENST00000504273 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
SNX25-202ENST00000504273 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
SNX25-202ENST00000504273 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
SNX25-202ENST00000504273 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
SNX25-202ENST00000504273 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
SNX25-202ENST00000504273 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
SNX25-202ENST00000504273 LCE1EQ5T753 118 aa2.08□□□□□ -2.08
SNX25-202ENST00000504273 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
SNX25-202ENST00000504273 MT1AP04731 61 aa2.06□□□□□ -2.08
SNX25-202ENST00000504273 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
SNX25-202ENST00000504273 PRM1P04553 51 aa2.01□□□□□ -2.09
SNX25-202ENST00000504273 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
SNX25-202ENST00000504273 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
SNX25-202ENST00000504273 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
SNX25-202ENST00000504273 KRTAP5-1Q6L8H4 278 aa1.74□□□□□ -2.13
SNX25-202ENST00000504273 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
SNX25-202ENST00000504273 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
SNX25-202ENST00000504273 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
SNX25-202ENST00000504273 LCE1BQ5T7P3 118 aa1.47□□□□□ -2.17
SNX25-202ENST00000504273 LCE1CQ5T751 118 aa1.46□□□□□ -2.18
SNX25-202ENST00000504273 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
SNX25-202ENST00000504273 KRTAP4-4Q9BYR3 166 aa1.32□□□□□ -2.2
SNX25-202ENST00000504273 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
SNX25-202ENST00000504273 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms