RNA–Protein interactions for RNA: ENST00000503799.5

CLDND1-210, Transcript of claudin domain containing 1, humanhuman

TSL 5

Gene CLDND1, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-210ENST00000503799 SPACA4Q8TDM5 124 aa1.15□□□□□ -2.23
CLDND1-210ENST00000503799 S4R3F8 94 aa1.15□□□□□ -2.23
CLDND1-210ENST00000503799 VPS13BQ7Z7G8 4022 aa1.15□□□□□ -2.23
CLDND1-210ENST00000503799 DNAH5Q8TE73 4624 aa1.14□□□□□ -2.23
CLDND1-210ENST00000503799 R4GN34 69 aa1.14□□□□□ -2.23
CLDND1-210ENST00000503799 PKHD1L1Q86WI1 4243 aa1.13□□□□□ -2.23
CLDND1-210ENST00000503799 Q5VSD8 79 aa1.13□□□□□ -2.23
CLDND1-210ENST00000503799 FAT3Q8TDW7 4589 aa1.13□□□□□ -2.23
CLDND1-210ENST00000503799 LRP1Q07954 4544 aaKnown RBP1.12□□□□□ -2.23
CLDND1-210ENST00000503799 INE1O15225 51 aa1.11□□□□□ -2.23
CLDND1-210ENST00000503799 KRTAP13-4Q3LI77 160 aa1.11□□□□□ -2.23
CLDND1-210ENST00000503799 Q6ZRN7 208 aaPredicted RBP1.11□□□□□ -2.23
CLDND1-210ENST00000503799 SSPOA2VEC9 5147 aa1.11□□□□□ -2.23
CLDND1-210ENST00000503799 KRTAP12-3P60328 96 aa1.1□□□□□ -2.23
CLDND1-210ENST00000503799 SMR3BP02814 79 aaPredicted RBP1.08□□□□□ -2.24
CLDND1-210ENST00000503799 KRTAP12-1P59990 96 aa1.08□□□□□ -2.24
CLDND1-210ENST00000503799 TNXBP22105 4242 aa1.07□□□□□ -2.24
CLDND1-210ENST00000503799 C9orf92A6NGG3 77 aa1.06□□□□□ -2.24
CLDND1-210ENST00000503799 USH2AO75445 5202 aa1.06□□□□□ -2.24
CLDND1-210ENST00000503799 LPAP08519 4548 aa1.05□□□□□ -2.24
CLDND1-210ENST00000503799 M0QZ58 72 aa1.04□□□□□ -2.24
CLDND1-210ENST00000503799 KRTAP20-1Q3LI63 56 aa1.04□□□□□ -2.24
CLDND1-210ENST00000503799 MT1HL1P0DM35 61 aa1.03□□□□□ -2.24
CLDND1-210ENST00000503799 DNAH8Q96JB1 4490 aa1.03□□□□□ -2.24
CLDND1-210ENST00000503799 NEBP20929 6669 aa1.01□□□□□ -2.25
CLDND1-210ENST00000503799 KRTAP6-3Q3LI67 103 aa1.01□□□□□ -2.25
CLDND1-210ENST00000503799 KRTAP10-4P60372 401 aaPredicted RBP1□□□□□ -2.25
CLDND1-210ENST00000503799 KMT2DO14686 5537 aa1□□□□□ -2.25
CLDND1-210ENST00000503799 SYNE2Q8WXH0 6885 aaKnown RBP1□□□□□ -2.25
CLDND1-210ENST00000503799 MACF1Q9UPN3 7388 aaKnown RBP0.99□□□□□ -2.25
CLDND1-210ENST00000503799 RPS29P62273 56 aaKnown RBP0.99□□□□□ -2.25
CLDND1-210ENST00000503799 MUC12Q9UKN1 5478 aa0.97□□□□□ -2.25
CLDND1-210ENST00000503799 TNP1P09430 55 aa0.97□□□□□ -2.25
CLDND1-210ENST00000503799 KRTAP2-3P0C7H8 128 aa0.95□□□□□ -2.26
CLDND1-210ENST00000503799 KRTAP2-4Q9BYR9 128 aa0.95□□□□□ -2.26
CLDND1-210ENST00000503799 MUC17Q685J3 4493 aa0.94□□□□□ -2.26
CLDND1-210ENST00000503799 MUC5BQ9HC84 5762 aaPredicted RBP0.94□□□□□ -2.26
CLDND1-210ENST00000503799 MDN1Q9NU22 5596 aa0.92□□□□□ -2.26
CLDND1-210ENST00000503799 MT1HP80294 61 aa0.9□□□□□ -2.27
CLDND1-210ENST00000503799 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
CLDND1-210ENST00000503799 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
CLDND1-210ENST00000503799 AHNAKQ09666 5890 aaKnown RBP0.88□□□□□ -2.27
CLDND1-210ENST00000503799 M0R2T5 61 aa0.87□□□□□ -2.27
CLDND1-210ENST00000503799 KRTAP19-2Q3LHN2 52 aa0.86□□□□□ -2.27
CLDND1-210ENST00000503799 KRTAP19-6Q3LI70 58 aa0.86□□□□□ -2.27
CLDND1-210ENST00000503799 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
CLDND1-210ENST00000503799 FLGP20930 4061 aaPredicted RBP0.83□□□□□ -2.28
CLDND1-210ENST00000503799 DSTQ03001 7570 aaKnown RBP0.82□□□□□ -2.28
CLDND1-210ENST00000503799 SPRR2EP22531 72 aa0.81□□□□□ -2.28
CLDND1-210ENST00000503799 SPRR2BP35325 72 aa0.81□□□□□ -2.28
CLDND1-210ENST00000503799 SPRR2AP35326 72 aa0.81□□□□□ -2.28
CLDND1-210ENST00000503799 KRTAP8-1Q8IUC2 63 aa0.8□□□□□ -2.28
CLDND1-210ENST00000503799 MT2AP02795 61 aa0.78□□□□□ -2.28
CLDND1-210ENST00000503799 SPRR2DP22532 72 aa0.78□□□□□ -2.28
CLDND1-210ENST00000503799 MT1FP04733 61 aa0.77□□□□□ -2.29
CLDND1-210ENST00000503799 MUC5ACP98088 5654 aa0.75□□□□□ -2.29
CLDND1-210ENST00000503799 SPRR2FQ96RM1 72 aa0.75□□□□□ -2.29
CLDND1-210ENST00000503799 SPRR2GQ9BYE4 73 aa0.72□□□□□ -2.29
CLDND1-210ENST00000503799 MT4P47944 62 aa0.71□□□□□ -2.3
CLDND1-210ENST00000503799 KRTAP19-5Q3LI72 72 aa0.71□□□□□ -2.3
CLDND1-210ENST00000503799 PRM1P04553 51 aa0.7□□□□□ -2.3
CLDND1-210ENST00000503799 MT1XP80297 61 aa0.68□□□□□ -2.3
CLDND1-210ENST00000503799 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
CLDND1-210ENST00000503799 KRTAP19-8Q3LI54 63 aa0.66□□□□□ -2.3
CLDND1-210ENST00000503799 MT1BP07438 61 aa0.64□□□□□ -2.31
CLDND1-210ENST00000503799 MT1LQ93083 61 aa0.62□□□□□ -2.31
CLDND1-210ENST00000503799 MT1GP13640 62 aa0.61□□□□□ -2.31
CLDND1-210ENST00000503799 KRTAP6-2Q3LI66 62 aa0.61□□□□□ -2.31
CLDND1-210ENST00000503799 MT1AP04731 61 aa0.6□□□□□ -2.31
CLDND1-210ENST00000503799 MT1EP04732 61 aa0.6□□□□□ -2.31
CLDND1-210ENST00000503799 KRTAP20-2Q3LI61 65 aa0.59□□□□□ -2.31
CLDND1-210ENST00000503799 KRTAP19-7Q3SYF9 63 aa0.59□□□□□ -2.31
CLDND1-210ENST00000503799 MT1MQ8N339 61 aa0.54□□□□□ -2.32
CLDND1-210ENST00000503799 KRTAP19-3Q7Z4W3 81 aa0.53□□□□□ -2.32
CLDND1-210ENST00000503799 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.32
CLDND1-210ENST00000503799 KRTAP6-1Q3LI64 71 aa0.52□□□□□ -2.33
CLDND1-210ENST00000503799 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
CLDND1-210ENST00000503799 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 112.5 ms