RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 MT2AP02795 61 aa2.15□□□□□ -2.07
CLDND1-208ENST00000503004 KRTAP9-7A8MTY7 169 aa2.13□□□□□ -2.07
CLDND1-208ENST00000503004 KRTAP2-2Q9BYT5 123 aa2.11□□□□□ -2.07
CLDND1-208ENST00000503004 LCE3AQ5TA76 89 aa2.08□□□□□ -2.08
CLDND1-208ENST00000503004 MT1BP07438 61 aa2.07□□□□□ -2.08
CLDND1-208ENST00000503004 KMT2DO14686 5537 aa2.06□□□□□ -2.08
CLDND1-208ENST00000503004 KRTAP19-8Q3LI54 63 aa2.06□□□□□ -2.08
CLDND1-208ENST00000503004 KRTAP10-5P60370 271 aa2.05□□□□□ -2.08
CLDND1-208ENST00000503004 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
CLDND1-208ENST00000503004 MT3P25713 68 aa2.05□□□□□ -2.08
CLDND1-208ENST00000503004 MT1XP80297 61 aa2.05□□□□□ -2.08
CLDND1-208ENST00000503004 LCE1AQ5T7P2 110 aa2.04□□□□□ -2.08
CLDND1-208ENST00000503004 KRTAP9-3Q9BYQ3 159 aa2.04□□□□□ -2.08
CLDND1-208ENST00000503004 FSIP2Q5CZC0 6907 aa2.02□□□□□ -2.09
CLDND1-208ENST00000503004 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
CLDND1-208ENST00000503004 KRTAP10-7P60409 375 aaPredicted RBP2.01□□□□□ -2.09
CLDND1-208ENST00000503004 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
CLDND1-208ENST00000503004 KRTAP10-12P60413 245 aa1.99□□□□□ -2.09
CLDND1-208ENST00000503004 KRTAP8-1Q8IUC2 63 aa1.99□□□□□ -2.09
CLDND1-208ENST00000503004 CRCT1Q9UGL9 99 aa1.98□□□□□ -2.09
CLDND1-208ENST00000503004 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
CLDND1-208ENST00000503004 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
CLDND1-208ENST00000503004 SSPOA2VEC9 5147 aa1.92□□□□□ -2.1
CLDND1-208ENST00000503004 KRTAP19-5Q3LI72 72 aa1.9□□□□□ -2.1
CLDND1-208ENST00000503004 LCE3CQ5T5A8 94 aa1.84□□□□□ -2.11
CLDND1-208ENST00000503004 KRTAP5-1Q6L8H4 278 aa1.84□□□□□ -2.11
CLDND1-208ENST00000503004 KRTAP19-7Q3SYF9 63 aa1.83□□□□□ -2.12
CLDND1-208ENST00000503004 FCGBPQ9Y6R7 5405 aaPredicted RBP1.83□□□□□ -2.12
CLDND1-208ENST00000503004 MUC12Q9UKN1 5478 aa1.83□□□□□ -2.12
CLDND1-208ENST00000503004 DSTQ03001 7570 aaKnown RBP1.83□□□□□ -2.12
CLDND1-208ENST00000503004 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
CLDND1-208ENST00000503004 KRTAP9-6A8MVA2 160 aa1.81□□□□□ -2.12
CLDND1-208ENST00000503004 KRTAP2-3P0C7H8 128 aa1.81□□□□□ -2.12
CLDND1-208ENST00000503004 KRTAP2-4Q9BYR9 128 aa1.81□□□□□ -2.12
CLDND1-208ENST00000503004 KRTAP2-1Q9BYU5 128 aa1.81□□□□□ -2.12
CLDND1-208ENST00000503004 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.12
CLDND1-208ENST00000503004 MT1EP04732 61 aa1.77□□□□□ -2.13
CLDND1-208ENST00000503004 MT1LQ93083 61 aa1.76□□□□□ -2.13
CLDND1-208ENST00000503004 KRTAP19-6Q3LI70 58 aa1.75□□□□□ -2.13
CLDND1-208ENST00000503004 MACF1Q9UPN3 7388 aaKnown RBP1.75□□□□□ -2.13
CLDND1-208ENST00000503004 LCE1EQ5T753 118 aa1.75□□□□□ -2.13
CLDND1-208ENST00000503004 SYNE2Q8WXH0 6885 aaKnown RBP1.72□□□□□ -2.13
CLDND1-208ENST00000503004 KRTAP4-3Q9BYR4 195 aa1.72□□□□□ -2.13
CLDND1-208ENST00000503004 KRTAP6-3Q3LI67 103 aa1.7□□□□□ -2.14
CLDND1-208ENST00000503004 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
CLDND1-208ENST00000503004 LCE3EQ5T5B0 92 aa1.69□□□□□ -2.14
CLDND1-208ENST00000503004 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
CLDND1-208ENST00000503004 MT1GP13640 62 aa1.68□□□□□ -2.14
CLDND1-208ENST00000503004 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
CLDND1-208ENST00000503004 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
CLDND1-208ENST00000503004 KRTAP19-3Q7Z4W3 81 aa1.66□□□□□ -2.14
CLDND1-208ENST00000503004 MT1MQ8N339 61 aa1.66□□□□□ -2.14
CLDND1-208ENST00000503004 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
CLDND1-208ENST00000503004 SPRR2FQ96RM1 72 aa1.64□□□□□ -2.15
CLDND1-208ENST00000503004 OBSCNQ5VST9 7968 aa1.62□□□□□ -2.15
CLDND1-208ENST00000503004 NEBP20929 6669 aa1.62□□□□□ -2.15
CLDND1-208ENST00000503004 LCE3DQ9BYE3 92 aa1.56□□□□□ -2.16
CLDND1-208ENST00000503004 PRM1P04553 51 aa1.55□□□□□ -2.16
CLDND1-208ENST00000503004 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
CLDND1-208ENST00000503004 SPRR2EP22531 72 aa1.48□□□□□ -2.17
CLDND1-208ENST00000503004 SPRR2BP35325 72 aa1.48□□□□□ -2.17
CLDND1-208ENST00000503004 SPRR2AP35326 72 aa1.48□□□□□ -2.17
CLDND1-208ENST00000503004 MT1AP04731 61 aa1.46□□□□□ -2.18
CLDND1-208ENST00000503004 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
CLDND1-208ENST00000503004 SPRR2DP22532 72 aa1.41□□□□□ -2.18
CLDND1-208ENST00000503004 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
CLDND1-208ENST00000503004 KRTAP5-10Q6L8G5 202 aa1.29□□□□□ -2.2
CLDND1-208ENST00000503004 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
CLDND1-208ENST00000503004 MT4P47944 62 aa1.28□□□□□ -2.2
CLDND1-208ENST00000503004 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
CLDND1-208ENST00000503004 KRTAP20-2Q3LI61 65 aa1.22□□□□□ -2.21
CLDND1-208ENST00000503004 LCE1CQ5T751 118 aa1.11□□□□□ -2.23
CLDND1-208ENST00000503004 LCE1BQ5T7P3 118 aa1.11□□□□□ -2.23
CLDND1-208ENST00000503004 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
CLDND1-208ENST00000503004 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
CLDND1-208ENST00000503004 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
CLDND1-208ENST00000503004 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 415 ms