RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 SONP18583 2426 aaKnown RBP1.46□□□□□ -2.18
SUB1-202ENST00000502453 A0A0D9SG42 100 aa1.46□□□□□ -2.18
SUB1-202ENST00000502453 STAB2Q8WWQ8 2551 aa1.45□□□□□ -2.18
SUB1-202ENST00000502453 Q5VSD8 79 aa1.45□□□□□ -2.18
SUB1-202ENST00000502453 KRTAP5-2Q701N4 177 aa1.45□□□□□ -2.18
SUB1-202ENST00000502453 NEBP20929 6669 aa1.45□□□□□ -2.18
SUB1-202ENST00000502453 SRRM2Q9UQ35 2752 aaKnown RBP1.45□□□□□ -2.18
SUB1-202ENST00000502453 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
SUB1-202ENST00000502453 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
SUB1-202ENST00000502453 KRTAP9-6A8MVA2 160 aa1.43□□□□□ -2.18
SUB1-202ENST00000502453 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
SUB1-202ENST00000502453 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
SUB1-202ENST00000502453 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
SUB1-202ENST00000502453 LRP2P98164 4655 aa1.42□□□□□ -2.18
SUB1-202ENST00000502453 FLGP20930 4061 aaPredicted RBP1.42□□□□□ -2.18
SUB1-202ENST00000502453 TNP1P09430 55 aa1.41□□□□□ -2.18
SUB1-202ENST00000502453 MUC17Q685J3 4493 aa1.41□□□□□ -2.18
SUB1-202ENST00000502453 OBSCNQ5VST9 7968 aa1.4□□□□□ -2.19
SUB1-202ENST00000502453 C9orf92A6NGG3 77 aa1.4□□□□□ -2.19
SUB1-202ENST00000502453 KRTAP5-4Q6L8H1 288 aa1.38□□□□□ -2.19
SUB1-202ENST00000502453 KRTAP10-4P60372 401 aaPredicted RBP1.34□□□□□ -2.2
SUB1-202ENST00000502453 KRTAP2-1Q9BYU5 128 aa1.31□□□□□ -2.2
SUB1-202ENST00000502453 KRTAP4-3Q9BYR4 195 aa1.28□□□□□ -2.2
SUB1-202ENST00000502453 KRTAP5-10Q6L8G5 202 aa1.27□□□□□ -2.21
SUB1-202ENST00000502453 DMBT1Q9UGM3 2413 aaPredicted RBP1.26□□□□□ -2.21
SUB1-202ENST00000502453 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
SUB1-202ENST00000502453 LCE3AQ5TA76 89 aa1.22□□□□□ -2.21
SUB1-202ENST00000502453 USH2AO75445 5202 aa1.22□□□□□ -2.21
SUB1-202ENST00000502453 SYNE2Q8WXH0 6885 aaKnown RBP1.22□□□□□ -2.21
SUB1-202ENST00000502453 M0R2T5 61 aa1.21□□□□□ -2.22
SUB1-202ENST00000502453 KRTAP5-8O75690 187 aa1.2□□□□□ -2.22
SUB1-202ENST00000502453 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
SUB1-202ENST00000502453 MT1HL1P0DM35 61 aa1.16□□□□□ -2.22
SUB1-202ENST00000502453 KRTAP19-2Q3LHN2 52 aa1.16□□□□□ -2.22
SUB1-202ENST00000502453 KRTAP5-5Q701N2 237 aaPredicted RBP1.16□□□□□ -2.22
SUB1-202ENST00000502453 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
SUB1-202ENST00000502453 KMT2DO14686 5537 aa1.13□□□□□ -2.23
SUB1-202ENST00000502453 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
SUB1-202ENST00000502453 FSIP2Q5CZC0 6907 aa1.13□□□□□ -2.23
SUB1-202ENST00000502453 MUC12Q9UKN1 5478 aa1.11□□□□□ -2.23
SUB1-202ENST00000502453 SMR3BP02814 79 aaPredicted RBP1.09□□□□□ -2.23
SUB1-202ENST00000502453 KRTAP8-1Q8IUC2 63 aa1.09□□□□□ -2.24
SUB1-202ENST00000502453 KRTAP4-1Q9BYQ7 146 aa1.08□□□□□ -2.24
SUB1-202ENST00000502453 KRTAP19-6Q3LI70 58 aa1.06□□□□□ -2.24
SUB1-202ENST00000502453 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
SUB1-202ENST00000502453 LCE1CQ5T751 118 aa1.03□□□□□ -2.24
SUB1-202ENST00000502453 LCE1BQ5T7P3 118 aa1.03□□□□□ -2.24
SUB1-202ENST00000502453 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
SUB1-202ENST00000502453 PRM1P04553 51 aa0.99□□□□□ -2.25
SUB1-202ENST00000502453 SPRR2GQ9BYE4 73 aa0.99□□□□□ -2.25
SUB1-202ENST00000502453 MT1HP80294 61 aa0.97□□□□□ -2.25
SUB1-202ENST00000502453 KRTAP19-3Q7Z4W3 81 aa0.94□□□□□ -2.26
SUB1-202ENST00000502453 KRTAP19-8Q3LI54 63 aa0.91□□□□□ -2.26
SUB1-202ENST00000502453 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
SUB1-202ENST00000502453 MT1FP04733 61 aa0.89□□□□□ -2.27
SUB1-202ENST00000502453 KRTAP19-5Q3LI72 72 aa0.88□□□□□ -2.27
SUB1-202ENST00000502453 MT2AP02795 61 aa0.87□□□□□ -2.27
SUB1-202ENST00000502453 MT1AP04731 61 aa0.87□□□□□ -2.27
SUB1-202ENST00000502453 SPRR2DP22532 72 aa0.87□□□□□ -2.27
SUB1-202ENST00000502453 MT1LQ93083 61 aa0.86□□□□□ -2.27
SUB1-202ENST00000502453 MT1EP04732 61 aa0.86□□□□□ -2.27
SUB1-202ENST00000502453 SPRR2EP22531 72 aa0.86□□□□□ -2.27
SUB1-202ENST00000502453 SPRR2BP35325 72 aa0.86□□□□□ -2.27
SUB1-202ENST00000502453 SPRR2AP35326 72 aa0.86□□□□□ -2.27
SUB1-202ENST00000502453 MT1BP07438 61 aa0.83□□□□□ -2.28
SUB1-202ENST00000502453 MT1GP13640 62 aa0.81□□□□□ -2.28
SUB1-202ENST00000502453 MT1XP80297 61 aa0.81□□□□□ -2.28
SUB1-202ENST00000502453 SPRR2FQ96RM1 72 aa0.8□□□□□ -2.28
SUB1-202ENST00000502453 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
SUB1-202ENST00000502453 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
SUB1-202ENST00000502453 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
SUB1-202ENST00000502453 MT1MQ8N339 61 aa0.74□□□□□ -2.29
SUB1-202ENST00000502453 KRTAP19-7Q3SYF9 63 aa0.7□□□□□ -2.3
SUB1-202ENST00000502453 KRTAP20-2Q3LI61 65 aa0.66□□□□□ -2.3
SUB1-202ENST00000502453 PHGR1C9JFL3 82 aa0.65□□□□□ -2.3
SUB1-202ENST00000502453 MT4P47944 62 aa0.6□□□□□ -2.31
SUB1-202ENST00000502453 KRTAP6-1Q3LI64 71 aa0.58□□□□□ -2.32
SUB1-202ENST00000502453 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 72 ms