RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 K7ERS5 55 aa2.86□□□□□ -1.95
USP46-203ENST00000502443 NEBP20929 6669 aa2.84□□□□□ -1.95
USP46-203ENST00000502443 SPRR2EP22531 72 aa2.84□□□□□ -1.95
USP46-203ENST00000502443 SPRR2BP35325 72 aa2.84□□□□□ -1.95
USP46-203ENST00000502443 SPRR2AP35326 72 aa2.84□□□□□ -1.95
USP46-203ENST00000502443 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
USP46-203ENST00000502443 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
USP46-203ENST00000502443 ROMO1P60602 79 aa2.79□□□□□ -1.96
USP46-203ENST00000502443 LCE1AQ5T7P2 110 aa2.79□□□□□ -1.96
USP46-203ENST00000502443 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
USP46-203ENST00000502443 C10orf95Q9H7T3 257 aa2.78□□□□□ -1.96
USP46-203ENST00000502443 KTN1-AS1Q86SY8 53 aa2.76□□□□□ -1.97
USP46-203ENST00000502443 TNP1P09430 55 aa2.74□□□□□ -1.97
USP46-203ENST00000502443 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
USP46-203ENST00000502443 SPRR2DP22532 72 aa2.74□□□□□ -1.97
USP46-203ENST00000502443 PRAC1Q96KF2 57 aa2.74□□□□□ -1.97
USP46-203ENST00000502443 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
USP46-203ENST00000502443 KRTAP19-7Q3SYF9 63 aa2.73□□□□□ -1.97
USP46-203ENST00000502443 MT1EP04732 61 aa2.7□□□□□ -1.98
USP46-203ENST00000502443 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
USP46-203ENST00000502443 KRTAP23-1A1A580 65 aa2.69□□□□□ -1.98
USP46-203ENST00000502443 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
USP46-203ENST00000502443 KRTAP25-1Q3LHN0 102 aa2.67□□□□□ -1.98
USP46-203ENST00000502443 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
USP46-203ENST00000502443 KRTAP2-2Q9BYT5 123 aa2.65□□□□□ -1.99
USP46-203ENST00000502443 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
USP46-203ENST00000502443 MT1GP13640 62 aa2.62□□□□□ -1.99
USP46-203ENST00000502443 KRTAP15-1Q3LI76 137 aa2.61□□□□□ -1.99
USP46-203ENST00000502443 PP632Q6XCG6 107 aa2.6□□□□□ -1.99
USP46-203ENST00000502443 MT1LQ93083 61 aa2.6□□□□□ -1.99
USP46-203ENST00000502443 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
USP46-203ENST00000502443 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
USP46-203ENST00000502443 MT1MQ8N339 61 aa2.57□□□□□ -2
USP46-203ENST00000502443 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
USP46-203ENST00000502443 A0A0A0MQY5 61 aa2.39□□□□□ -2.03
USP46-203ENST00000502443 MT4P47944 62 aa2.39□□□□□ -2.03
USP46-203ENST00000502443 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
USP46-203ENST00000502443 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
USP46-203ENST00000502443 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
USP46-203ENST00000502443 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
USP46-203ENST00000502443 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
USP46-203ENST00000502443 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
USP46-203ENST00000502443 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
USP46-203ENST00000502443 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
USP46-203ENST00000502443 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
USP46-203ENST00000502443 MT1AP04731 61 aa2.21□□□□□ -2.06
USP46-203ENST00000502443 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
USP46-203ENST00000502443 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
USP46-203ENST00000502443 SYNE1Q8NF91 8797 aaKnown RBP2.17□□□□□ -2.06
USP46-203ENST00000502443 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
USP46-203ENST00000502443 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
USP46-203ENST00000502443 NDUFAF8A1L188 74 aa2.15□□□□□ -2.07
USP46-203ENST00000502443 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
USP46-203ENST00000502443 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.07
USP46-203ENST00000502443 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
USP46-203ENST00000502443 MT3P25713 68 aa2.03□□□□□ -2.08
USP46-203ENST00000502443 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
USP46-203ENST00000502443 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
USP46-203ENST00000502443 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
USP46-203ENST00000502443 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
USP46-203ENST00000502443 OBSCNQ5VST9 7968 aa1.95□□□□□ -2.1
USP46-203ENST00000502443 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
USP46-203ENST00000502443 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
USP46-203ENST00000502443 INE1O15225 51 aa1.76□□□□□ -2.13
USP46-203ENST00000502443 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
USP46-203ENST00000502443 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
USP46-203ENST00000502443 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
USP46-203ENST00000502443 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
USP46-203ENST00000502443 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
USP46-203ENST00000502443 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
USP46-203ENST00000502443 LCE3EQ5T5B0 92 aa1.67□□□□□ -2.14
USP46-203ENST00000502443 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
USP46-203ENST00000502443 PRM1P04553 51 aa1.46□□□□□ -2.18
USP46-203ENST00000502443 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
USP46-203ENST00000502443 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
USP46-203ENST00000502443 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
USP46-203ENST00000502443 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
USP46-203ENST00000502443 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 67.2 ms