RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 GPR98Q8WXG9 6306 aa6.95□□□□□ -1.3
PRKCB-209ENST00000498058 MT1EP04732 61 aa6.94□□□□□ -1.3
PRKCB-209ENST00000498058 TNP1P09430 55 aa6.91□□□□□ -1.3
PRKCB-209ENST00000498058 KRTAP19-3Q7Z4W3 81 aa6.91□□□□□ -1.3
PRKCB-209ENST00000498058 ROMO1P60602 79 aa6.81□□□□□ -1.32
PRKCB-209ENST00000498058 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
PRKCB-209ENST00000498058 KRTAP19-5Q3LI72 72 aa6.74□□□□□ -1.33
PRKCB-209ENST00000498058 LCE1DQ5T752 114 aa6.74□□□□□ -1.33
PRKCB-209ENST00000498058 MT1GP13640 62 aa6.7□□□□□ -1.34
PRKCB-209ENST00000498058 PRO0628Q9UI54 55 aa6.64□□□□□ -1.35
PRKCB-209ENST00000498058 MT1MQ8N339 61 aa6.63□□□□□ -1.35
PRKCB-209ENST00000498058 MT4P47944 62 aa6.62□□□□□ -1.35
PRKCB-209ENST00000498058 PMAIP1Q13794 54 aa6.62□□□□□ -1.35
PRKCB-209ENST00000498058 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
PRKCB-209ENST00000498058 HMCN1Q96RW7 5635 aa6.61□□□□□ -1.35
PRKCB-209ENST00000498058 LCE4AQ5TA78 99 aa6.6□□□□□ -1.35
PRKCB-209ENST00000498058 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
PRKCB-209ENST00000498058 MT1LQ93083 61 aa6.58□□□□□ -1.36
PRKCB-209ENST00000498058 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
PRKCB-209ENST00000498058 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
PRKCB-209ENST00000498058 AHNAK2Q8IVF2 5795 aa6.5□□□□□ -1.37
PRKCB-209ENST00000498058 KRTAP5-4Q6L8H1 288 aa6.49□□□□□ -1.37
PRKCB-209ENST00000498058 KRTAP4-6Q9BYQ5 205 aa6.44□□□□□ -1.38
PRKCB-209ENST00000498058 KRTAP12-3P60328 96 aa6.4□□□□□ -1.38
PRKCB-209ENST00000498058 KRTAP5-10Q6L8G5 202 aa6.4□□□□□ -1.38
PRKCB-209ENST00000498058 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
PRKCB-209ENST00000498058 KTN1-AS1Q86SY8 53 aa6.21□□□□□ -1.42
PRKCB-209ENST00000498058 KRTAP5-3Q6L8H2 238 aa6.18□□□□□ -1.42
PRKCB-209ENST00000498058 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
PRKCB-209ENST00000498058 KRTAP5-7Q6L8G8 165 aa6.17□□□□□ -1.42
PRKCB-209ENST00000498058 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
PRKCB-209ENST00000498058 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
PRKCB-209ENST00000498058 KRTAP20-2Q3LI61 65 aa6.14□□□□□ -1.43
PRKCB-209ENST00000498058 KRTAP5-5Q701N2 237 aaPredicted RBP6.12□□□□□ -1.43
PRKCB-209ENST00000498058 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
PRKCB-209ENST00000498058 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
PRKCB-209ENST00000498058 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
PRKCB-209ENST00000498058 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
PRKCB-209ENST00000498058 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
PRKCB-209ENST00000498058 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
PRKCB-209ENST00000498058 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
PRKCB-209ENST00000498058 KRTAP5-2Q701N4 177 aa5.64□□□□□ -1.51
PRKCB-209ENST00000498058 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
PRKCB-209ENST00000498058 MT1AP04731 61 aa5.58□□□□□ -1.52
PRKCB-209ENST00000498058 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
PRKCB-209ENST00000498058 KRTAP5-8O75690 187 aa5.5□□□□□ -1.53
PRKCB-209ENST00000498058 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
PRKCB-209ENST00000498058 H3BS24 57 aa5.41□□□□□ -1.54
PRKCB-209ENST00000498058 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
PRKCB-209ENST00000498058 AHNAKQ09666 5890 aaKnown RBP5.36□□□□□ -1.55
PRKCB-209ENST00000498058 MUC5BQ9HC84 5762 aaPredicted RBP5.35□□□□□ -1.55
PRKCB-209ENST00000498058 OBSCNQ5VST9 7968 aa5.35□□□□□ -1.55
PRKCB-209ENST00000498058 MUC5ACP98088 5654 aa5.34□□□□□ -1.55
PRKCB-209ENST00000498058 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
PRKCB-209ENST00000498058 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
PRKCB-209ENST00000498058 KRTAP5-1Q6L8H4 278 aa5.12□□□□□ -1.59
PRKCB-209ENST00000498058 MT3P25713 68 aa5.08□□□□□ -1.6
PRKCB-209ENST00000498058 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
PRKCB-209ENST00000498058 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
PRKCB-209ENST00000498058 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
PRKCB-209ENST00000498058 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
PRKCB-209ENST00000498058 A0A0A0MQY5 61 aa4.44□□□□□ -1.7
PRKCB-209ENST00000498058 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
PRKCB-209ENST00000498058 LCE1CQ5T751 118 aa4.4□□□□□ -1.71
PRKCB-209ENST00000498058 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
PRKCB-209ENST00000498058 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
PRKCB-209ENST00000498058 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
PRKCB-209ENST00000498058 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
PRKCB-209ENST00000498058 INE1O15225 51 aa3.95□□□□□ -1.78
PRKCB-209ENST00000498058 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
PRKCB-209ENST00000498058 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
PRKCB-209ENST00000498058 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
PRKCB-209ENST00000498058 PRM1P04553 51 aa3.48□□□□□ -1.85
PRKCB-209ENST00000498058 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
PRKCB-209ENST00000498058 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
PRKCB-209ENST00000498058 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
PRKCB-209ENST00000498058 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 56.2 ms