RNA–Protein interactions for RNA: ENST00000498038.1

HLA-DPB1-217, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-217ENST00000498038 SPRR2DP22532 72 aa7.13□□□□□ -1.27
HLA-DPB1-217ENST00000498038 KRTAP19-3Q7Z4W3 81 aa7.1□□□□□ -1.27
HLA-DPB1-217ENST00000498038 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
HLA-DPB1-217ENST00000498038 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
HLA-DPB1-217ENST00000498038 KRTAP2-2Q9BYT5 123 aa7.07□□□□□ -1.28
HLA-DPB1-217ENST00000498038 KRTAP2-1Q9BYU5 128 aa7.07□□□□□ -1.28
HLA-DPB1-217ENST00000498038 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
HLA-DPB1-217ENST00000498038 MT1LQ93083 61 aa7.01□□□□□ -1.29
HLA-DPB1-217ENST00000498038 MT1GP13640 62 aa6.99□□□□□ -1.29
HLA-DPB1-217ENST00000498038 PP632Q6XCG6 107 aa6.94□□□□□ -1.3
HLA-DPB1-217ENST00000498038 LCE3BQ5TA77 95 aa6.9□□□□□ -1.3
HLA-DPB1-217ENST00000498038 MT1MQ8N339 61 aa6.88□□□□□ -1.31
HLA-DPB1-217ENST00000498038 PMAIP1Q13794 54 aa6.82□□□□□ -1.32
HLA-DPB1-217ENST00000498038 GPR98Q8WXG9 6306 aa6.79□□□□□ -1.32
HLA-DPB1-217ENST00000498038 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
HLA-DPB1-217ENST00000498038 KRTAP4-3Q9BYR4 195 aa6.73□□□□□ -1.33
HLA-DPB1-217ENST00000498038 KRTAP4-7Q9BYR0 210 aa6.72□□□□□ -1.33
HLA-DPB1-217ENST00000498038 DSTQ03001 7570 aaKnown RBP6.71□□□□□ -1.34
HLA-DPB1-217ENST00000498038 PRO0628Q9UI54 55 aa6.68□□□□□ -1.34
HLA-DPB1-217ENST00000498038 KRTAP19-4Q3LI73 84 aa6.67□□□□□ -1.34
HLA-DPB1-217ENST00000498038 LCE3CQ5T5A8 94 aa6.57□□□□□ -1.36
HLA-DPB1-217ENST00000498038 PRAC1Q96KF2 57 aa6.45□□□□□ -1.38
HLA-DPB1-217ENST00000498038 LOC100996750A0A140TA64 210 aa6.35□□□□□ -1.39
HLA-DPB1-217ENST00000498038 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
HLA-DPB1-217ENST00000498038 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
HLA-DPB1-217ENST00000498038 KTN1-AS1Q86SY8 53 aa6.28□□□□□ -1.4
HLA-DPB1-217ENST00000498038 KRTAP5-4Q6L8H1 288 aa6.26□□□□□ -1.41
HLA-DPB1-217ENST00000498038 KRTAP5-5Q701N2 237 aaPredicted RBP6.23□□□□□ -1.41
HLA-DPB1-217ENST00000498038 MT4P47944 62 aa6.21□□□□□ -1.42
HLA-DPB1-217ENST00000498038 LCE1DQ5T752 114 aa6.19□□□□□ -1.42
HLA-DPB1-217ENST00000498038 KRTAP9-6A8MVA2 160 aa6.17□□□□□ -1.42
HLA-DPB1-217ENST00000498038 HMCN1Q96RW7 5635 aa6.14□□□□□ -1.43
HLA-DPB1-217ENST00000498038 AHNAK2Q8IVF2 5795 aa6.1□□□□□ -1.43
HLA-DPB1-217ENST00000498038 KRTAP4-6Q9BYQ5 205 aa6.07□□□□□ -1.44
HLA-DPB1-217ENST00000498038 KRTAP5-10Q6L8G5 202 aa6□□□□□ -1.45
HLA-DPB1-217ENST00000498038 SVIPQ8NHG7 77 aa6□□□□□ -1.45
HLA-DPB1-217ENST00000498038 KRTAP12-4P60329 112 aa5.99□□□□□ -1.45
HLA-DPB1-217ENST00000498038 MT1AP04731 61 aa5.97□□□□□ -1.45
HLA-DPB1-217ENST00000498038 KRTAP6-1Q3LI64 71 aa5.92□□□□□ -1.46
HLA-DPB1-217ENST00000498038 SYNE1Q8NF91 8797 aaKnown RBP5.91□□□□□ -1.46
HLA-DPB1-217ENST00000498038 SPRR5A0A1B0GTR4 108 aa5.91□□□□□ -1.46
HLA-DPB1-217ENST00000498038 KRTAP20-2Q3LI61 65 aa5.9□□□□□ -1.46
HLA-DPB1-217ENST00000498038 KRTAP5-7Q6L8G8 165 aa5.86□□□□□ -1.47
HLA-DPB1-217ENST00000498038 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
HLA-DPB1-217ENST00000498038 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
HLA-DPB1-217ENST00000498038 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
HLA-DPB1-217ENST00000498038 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
HLA-DPB1-217ENST00000498038 MT3P25713 68 aa5.46□□□□□ -1.54
HLA-DPB1-217ENST00000498038 LUZP6Q538Z0 58 aa5.38□□□□□ -1.55
HLA-DPB1-217ENST00000498038 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
HLA-DPB1-217ENST00000498038 AHNAKQ09666 5890 aaKnown RBP5.21□□□□□ -1.58
HLA-DPB1-217ENST00000498038 MUC5ACP98088 5654 aa5.13□□□□□ -1.59
HLA-DPB1-217ENST00000498038 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
HLA-DPB1-217ENST00000498038 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
HLA-DPB1-217ENST00000498038 KRTAP5-8O75690 187 aa5.08□□□□□ -1.6
HLA-DPB1-217ENST00000498038 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
HLA-DPB1-217ENST00000498038 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
HLA-DPB1-217ENST00000498038 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
HLA-DPB1-217ENST00000498038 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
HLA-DPB1-217ENST00000498038 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
HLA-DPB1-217ENST00000498038 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
HLA-DPB1-217ENST00000498038 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
HLA-DPB1-217ENST00000498038 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
HLA-DPB1-217ENST00000498038 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
HLA-DPB1-217ENST00000498038 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
HLA-DPB1-217ENST00000498038 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
HLA-DPB1-217ENST00000498038 H3BS24 57 aa4.02□□□□□ -1.77
HLA-DPB1-217ENST00000498038 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
HLA-DPB1-217ENST00000498038 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
HLA-DPB1-217ENST00000498038 INE1O15225 51 aa3.9□□□□□ -1.79
HLA-DPB1-217ENST00000498038 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
HLA-DPB1-217ENST00000498038 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
HLA-DPB1-217ENST00000498038 PRM1P04553 51 aa3.74□□□□□ -1.81
HLA-DPB1-217ENST00000498038 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
HLA-DPB1-217ENST00000498038 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
HLA-DPB1-217ENST00000498038 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
HLA-DPB1-217ENST00000498038 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
HLA-DPB1-217ENST00000498038 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 39.2 ms