RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	KRTAP23-1	A1A580	65 aa		5.68	□□□□□ -1.5
UMPS-209	ENST00000497791	SPRR2F	Q96RM1	72 aa		5.67	□□□□□ -1.5
UMPS-209	ENST00000497791	BRK1	Q8WUW1	75 aa		5.64	□□□□□ -1.51
UMPS-209	ENST00000497791	LCE3A	Q5TA76	89 aa		5.62	□□□□□ -1.51
UMPS-209	ENST00000497791	NEB	P20929	6669 aa		5.61	□□□□□ -1.51
UMPS-209	ENST00000497791	KRTAP19-7	Q3SYF9	63 aa		5.58	□□□□□ -1.52
UMPS-209	ENST00000497791	KRTAP25-1	Q3LHN0	102 aa		5.56	□□□□□ -1.52
UMPS-209	ENST00000497791	ROMO1	P60602	79 aa		5.56	□□□□□ -1.52
UMPS-209	ENST00000497791		A0A0A0MQY5	61 aa		5.55	□□□□□ -1.52
UMPS-209	ENST00000497791	KRTAP19-5	Q3LI72	72 aa		5.54	□□□□□ -1.52
UMPS-209	ENST00000497791	MT1E	P04732	61 aa		5.5	□□□□□ -1.53
UMPS-209	ENST00000497791	SPRR2E	P22531	72 aa		5.48	□□□□□ -1.53
UMPS-209	ENST00000497791	SPRR2B	P35325	72 aa		5.48	□□□□□ -1.53
UMPS-209	ENST00000497791	SPRR2A	P35326	72 aa		5.48	□□□□□ -1.53
UMPS-209	ENST00000497791	LCE1A	Q5T7P2	110 aa		5.48	□□□□□ -1.53
UMPS-209	ENST00000497791	KRTAP15-1	Q3LI76	137 aa		5.47	□□□□□ -1.53
UMPS-209	ENST00000497791	KRTAP12-3	P60328	96 aa		5.37	□□□□□ -1.55
UMPS-209	ENST00000497791	KRTAP19-3	Q7Z4W3	81 aa		5.34	□□□□□ -1.56
UMPS-209	ENST00000497791	MT1L	Q93083	61 aa		5.32	□□□□□ -1.56
UMPS-209	ENST00000497791	PMAIP1	Q13794	54 aa		5.31	□□□□□ -1.56
UMPS-209	ENST00000497791	KRTAP5-3	Q6L8H2	238 aa		5.29	□□□□□ -1.56
UMPS-209	ENST00000497791	SPRR2D	P22532	72 aa		5.28	□□□□□ -1.56
UMPS-209	ENST00000497791	PRO0628	Q9UI54	55 aa		5.27	□□□□□ -1.57
UMPS-209	ENST00000497791	DST	Q03001	7570 aa	Known RBP	5.26	□□□□□ -1.57
UMPS-209	ENST00000497791	PP632	Q6XCG6	107 aa		5.24	□□□□□ -1.57
UMPS-209	ENST00000497791	MT1G	P13640	62 aa		5.22	□□□□□ -1.57
UMPS-209	ENST00000497791	MT1M	Q8N339	61 aa		5.2	□□□□□ -1.58
UMPS-209	ENST00000497791	KRTAP20-1	Q3LI63	56 aa		5.18	□□□□□ -1.58
UMPS-209	ENST00000497791	KRTAP4-3	Q9BYR4	195 aa		5.15	□□□□□ -1.59
UMPS-209	ENST00000497791	KRTAP2-3	P0C7H8	128 aa		5.14	□□□□□ -1.59
UMPS-209	ENST00000497791	KRTAP2-4	Q9BYR9	128 aa		5.14	□□□□□ -1.59
UMPS-209	ENST00000497791	PRAC1	Q96KF2	57 aa		5.1	□□□□□ -1.59
UMPS-209	ENST00000497791	KRTAP2-2	Q9BYT5	123 aa		5	□□□□□ -1.61
UMPS-209	ENST00000497791	KRTAP2-1	Q9BYU5	128 aa		5	□□□□□ -1.61
UMPS-209	ENST00000497791	LCE3C	Q5T5A8	94 aa		4.99	□□□□□ -1.61
UMPS-209	ENST00000497791	KTN1-AS1	Q86SY8	53 aa		4.94	□□□□□ -1.62
UMPS-209	ENST00000497791	KRTAP9-6	A8MVA2	160 aa		4.78	□□□□□ -1.64
UMPS-209	ENST00000497791	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.73	□□□□□ -1.65
UMPS-209	ENST00000497791	KRTAP5-4	Q6L8H1	288 aa		4.7	□□□□□ -1.66
UMPS-209	ENST00000497791	HMCN1	Q96RW7	5635 aa		4.66	□□□□□ -1.66
UMPS-209	ENST00000497791	MT4	P47944	62 aa		4.64	□□□□□ -1.67
UMPS-209	ENST00000497791	SYNE1	Q8NF91	8797 aa	Known RBP	4.6	□□□□□ -1.67
UMPS-209	ENST00000497791	SPRR5	A0A1B0GTR4	108 aa		4.55	□□□□□ -1.68
UMPS-209	ENST00000497791	KRTAP6-1	Q3LI64	71 aa		4.51	□□□□□ -1.69
UMPS-209	ENST00000497791	MT1A	P04731	61 aa		4.5	□□□□□ -1.69
UMPS-209	ENST00000497791	KRTAP12-4	P60329	112 aa		4.43	□□□□□ -1.7
UMPS-209	ENST00000497791	KRTAP20-2	Q3LI61	65 aa		4.41	□□□□□ -1.7
UMPS-209	ENST00000497791	AHNAK2	Q8IVF2	5795 aa		4.35	□□□□□ -1.71
UMPS-209	ENST00000497791	GPR98	Q8WXG9	6306 aa		4.23	□□□□□ -1.73
UMPS-209	ENST00000497791	KRTAP6-2	Q3LI66	62 aa		4.21	□□□□□ -1.74
UMPS-209	ENST00000497791	KRTAP5-2	Q701N4	177 aa		4.19	□□□□□ -1.74
UMPS-209	ENST00000497791	MT3	P25713	68 aa		4.19	□□□□□ -1.74
UMPS-209	ENST00000497791	LUZP6	Q538Z0	58 aa		4.12	□□□□□ -1.75
UMPS-209	ENST00000497791	KRTAP5-11	Q6L8G4	156 aa		4.11	□□□□□ -1.75
UMPS-209	ENST00000497791	KRTAP5-10	Q6L8G5	202 aa		4.06	□□□□□ -1.76
UMPS-209	ENST00000497791	LCE1E	Q5T753	118 aa		4.06	□□□□□ -1.76
UMPS-209	ENST00000497791	OBSCN	Q5VST9	7968 aa		4.04	□□□□□ -1.76
UMPS-209	ENST00000497791	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.02	□□□□□ -1.77
UMPS-209	ENST00000497791	NDUFAF8	A1L188	74 aa		3.87	□□□□□ -1.79
UMPS-209	ENST00000497791	KRTAP5-7	Q6L8G8	165 aa		3.82	□□□□□ -1.8
UMPS-209	ENST00000497791	KRTAP5-8	O75690	187 aa		3.79	□□□□□ -1.8
UMPS-209	ENST00000497791	LCE1F	Q5T754	118 aa		3.79	□□□□□ -1.8
UMPS-209	ENST00000497791	MUC5AC	P98088	5654 aa		3.77	□□□□□ -1.81
UMPS-209	ENST00000497791	KRTAP5-1	Q6L8H4	278 aa		3.7	□□□□□ -1.82
UMPS-209	ENST00000497791	LCE3D	Q9BYE3	92 aa		3.66	□□□□□ -1.82
UMPS-209	ENST00000497791	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.56	□□□□□ -1.84
UMPS-209	ENST00000497791	LCE3E	Q5T5B0	92 aa		3.5	□□□□□ -1.85
UMPS-209	ENST00000497791	LCE1B	Q5T7P3	118 aa		3.45	□□□□□ -1.86
UMPS-209	ENST00000497791	AHNAK	Q09666	5890 aa	Known RBP	3.45	□□□□□ -1.86
UMPS-209	ENST00000497791	LCE1C	Q5T751	118 aa		3.38	□□□□□ -1.87
UMPS-209	ENST00000497791	KRTAP4-4	Q9BYR3	166 aa		3.36	□□□□□ -1.87
UMPS-209	ENST00000497791	INE1	O15225	51 aa		3.07	□□□□□ -1.92
UMPS-209	ENST00000497791	KRTAP21-2	Q3LI59	83 aa		2.95	□□□□□ -1.94
UMPS-209	ENST00000497791	PRM1	P04553	51 aa		2.91	□□□□□ -1.94
UMPS-209	ENST00000497791	PHGR1	C9JFL3	82 aa		2.62	□□□□□ -1.99
UMPS-209	ENST00000497791	MUC19	Q7Z5P9	8384 aa		2.46	□□□□□ -2.02
UMPS-209	ENST00000497791	KRTAP21-1	Q3LI58	79 aa		1.72	□□□□□ -2.13
UMPS-209	ENST00000497791	MUC16	Q8WXI7	14507 aa		1.69	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 57.6 ms