RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 KRTAP10-7P60409 375 aaPredicted RBP7.2□□□□□ -1.26
ELL3-208ENST00000497700 LCE3BQ5TA77 95 aa7.19□□□□□ -1.26
ELL3-208ENST00000497700 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
ELL3-208ENST00000497700 KRTAP10-12P60413 245 aa7.1□□□□□ -1.27
ELL3-208ENST00000497700 TNP1P09430 55 aa6.97□□□□□ -1.29
ELL3-208ENST00000497700 GPR98Q8WXG9 6306 aa6.93□□□□□ -1.3
ELL3-208ENST00000497700 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
ELL3-208ENST00000497700 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
ELL3-208ENST00000497700 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
ELL3-208ENST00000497700 DSTQ03001 7570 aaKnown RBP6.83□□□□□ -1.32
ELL3-208ENST00000497700 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
ELL3-208ENST00000497700 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
ELL3-208ENST00000497700 LCE3AQ5TA76 89 aa6.69□□□□□ -1.34
ELL3-208ENST00000497700 MT1EP04732 61 aa6.68□□□□□ -1.34
ELL3-208ENST00000497700 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
ELL3-208ENST00000497700 LCE1DQ5T752 114 aa6.61□□□□□ -1.35
ELL3-208ENST00000497700 MT4P47944 62 aa6.51□□□□□ -1.37
ELL3-208ENST00000497700 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
ELL3-208ENST00000497700 KRTAP19-5Q3LI72 72 aa6.47□□□□□ -1.37
ELL3-208ENST00000497700 HMCN1Q96RW7 5635 aa6.46□□□□□ -1.37
ELL3-208ENST00000497700 MT1GP13640 62 aa6.44□□□□□ -1.38
ELL3-208ENST00000497700 KRTAP12-3P60328 96 aa6.44□□□□□ -1.38
ELL3-208ENST00000497700 LCE4AQ5TA78 99 aa6.43□□□□□ -1.38
ELL3-208ENST00000497700 AHNAK2Q8IVF2 5795 aa6.4□□□□□ -1.39
ELL3-208ENST00000497700 MT1MQ8N339 61 aa6.39□□□□□ -1.39
ELL3-208ENST00000497700 KRTAP4-3Q9BYR4 195 aa6.34□□□□□ -1.39
ELL3-208ENST00000497700 MT1LQ93083 61 aa6.32□□□□□ -1.4
ELL3-208ENST00000497700 KRTAP5-10Q6L8G5 202 aa6.3□□□□□ -1.4
ELL3-208ENST00000497700 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
ELL3-208ENST00000497700 KRTAP5-4Q6L8H1 288 aa6.27□□□□□ -1.41
ELL3-208ENST00000497700 SPRR5A0A1B0GTR4 108 aa6.15□□□□□ -1.42
ELL3-208ENST00000497700 LUZP6Q538Z0 58 aa6.13□□□□□ -1.43
ELL3-208ENST00000497700 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
ELL3-208ENST00000497700 NDUFAF8A1L188 74 aa6.08□□□□□ -1.44
ELL3-208ENST00000497700 KRTAP5-3Q6L8H2 238 aa6.08□□□□□ -1.44
ELL3-208ENST00000497700 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
ELL3-208ENST00000497700 KRTAP5-7Q6L8G8 165 aa6.07□□□□□ -1.44
ELL3-208ENST00000497700 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
ELL3-208ENST00000497700 KRTAP20-2Q3LI61 65 aa5.97□□□□□ -1.45
ELL3-208ENST00000497700 KRTAP5-5Q701N2 237 aaPredicted RBP5.88□□□□□ -1.47
ELL3-208ENST00000497700 H3BS24 57 aa5.79□□□□□ -1.48
ELL3-208ENST00000497700 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
ELL3-208ENST00000497700 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
ELL3-208ENST00000497700 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
ELL3-208ENST00000497700 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
ELL3-208ENST00000497700 A0A0A0MQY5 61 aa5.54□□□□□ -1.52
ELL3-208ENST00000497700 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
ELL3-208ENST00000497700 KRTAP5-2Q701N4 177 aa5.44□□□□□ -1.54
ELL3-208ENST00000497700 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
ELL3-208ENST00000497700 KRTAP5-8O75690 187 aa5.37□□□□□ -1.55
ELL3-208ENST00000497700 MT1AP04731 61 aa5.35□□□□□ -1.55
ELL3-208ENST00000497700 AHNAKQ09666 5890 aaKnown RBP5.3□□□□□ -1.56
ELL3-208ENST00000497700 MUC5ACP98088 5654 aa5.29□□□□□ -1.56
ELL3-208ENST00000497700 MUC5BQ9HC84 5762 aaPredicted RBP5.26□□□□□ -1.57
ELL3-208ENST00000497700 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
ELL3-208ENST00000497700 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
ELL3-208ENST00000497700 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
ELL3-208ENST00000497700 INE1O15225 51 aa5.16□□□□□ -1.58
ELL3-208ENST00000497700 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
ELL3-208ENST00000497700 KRTAP5-1Q6L8H4 278 aa4.96□□□□□ -1.62
ELL3-208ENST00000497700 MT3P25713 68 aa4.88□□□□□ -1.63
ELL3-208ENST00000497700 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
ELL3-208ENST00000497700 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
ELL3-208ENST00000497700 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
ELL3-208ENST00000497700 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
ELL3-208ENST00000497700 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
ELL3-208ENST00000497700 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
ELL3-208ENST00000497700 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
ELL3-208ENST00000497700 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
ELL3-208ENST00000497700 PRM1P04553 51 aa3.86□□□□□ -1.79
ELL3-208ENST00000497700 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
ELL3-208ENST00000497700 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
ELL3-208ENST00000497700 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
ELL3-208ENST00000497700 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
ELL3-208ENST00000497700 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
ELL3-208ENST00000497700 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
ELL3-208ENST00000497700 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
ELL3-208ENST00000497700 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 197.6 ms