RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 KRTAP23-1A1A580 65 aa7.96□□□□□ -1.14
ACTN4-208ENST00000497637 PP632Q6XCG6 107 aa7.96□□□□□ -1.14
ACTN4-208ENST00000497637 KRTAP8-1Q8IUC2 63 aa7.91□□□□□ -1.14
ACTN4-208ENST00000497637 LCE3BQ5TA77 95 aa7.9□□□□□ -1.14
ACTN4-208ENST00000497637 KRTAP10-7P60409 375 aaPredicted RBP7.76□□□□□ -1.17
ACTN4-208ENST00000497637 DSTQ03001 7570 aaKnown RBP7.75□□□□□ -1.17
ACTN4-208ENST00000497637 LCE3AQ5TA76 89 aa7.72□□□□□ -1.17
ACTN4-208ENST00000497637 KRTAP10-12P60413 245 aa7.7□□□□□ -1.18
ACTN4-208ENST00000497637 KRTAP4-9Q9BYQ8 210 aa7.54□□□□□ -1.2
ACTN4-208ENST00000497637 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
ACTN4-208ENST00000497637 KRTAP4-8Q9BYQ9 185 aa7.5□□□□□ -1.21
ACTN4-208ENST00000497637 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
ACTN4-208ENST00000497637 KRTAP15-1Q3LI76 137 aa7.37□□□□□ -1.23
ACTN4-208ENST00000497637 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
ACTN4-208ENST00000497637 HMCN1Q96RW7 5635 aa7.34□□□□□ -1.23
ACTN4-208ENST00000497637 AHNAK2Q8IVF2 5795 aa7.3□□□□□ -1.24
ACTN4-208ENST00000497637 LCE1DQ5T752 114 aa7.29□□□□□ -1.24
ACTN4-208ENST00000497637 KRTAP5-10Q6L8G5 202 aa7.24□□□□□ -1.25
ACTN4-208ENST00000497637 KRTAP19-7Q3SYF9 63 aa7.22□□□□□ -1.25
ACTN4-208ENST00000497637 SPRR5A0A1B0GTR4 108 aa7.11□□□□□ -1.27
ACTN4-208ENST00000497637 KRTAP5-7Q6L8G8 165 aa7.11□□□□□ -1.27
ACTN4-208ENST00000497637 MT1EP04732 61 aa7.1□□□□□ -1.27
ACTN4-208ENST00000497637 LCE4AQ5TA78 99 aa7.09□□□□□ -1.27
ACTN4-208ENST00000497637 MT4P47944 62 aa7.08□□□□□ -1.28
ACTN4-208ENST00000497637 LCE5AQ5TCM9 118 aa7.08□□□□□ -1.28
ACTN4-208ENST00000497637 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
ACTN4-208ENST00000497637 MT1LQ93083 61 aa6.98□□□□□ -1.29
ACTN4-208ENST00000497637 LCE3CQ5T5A8 94 aa6.95□□□□□ -1.3
ACTN4-208ENST00000497637 KRTAP19-3Q7Z4W3 81 aa6.93□□□□□ -1.3
ACTN4-208ENST00000497637 LUZP6Q538Z0 58 aa6.88□□□□□ -1.31
ACTN4-208ENST00000497637 KRTAP5-3Q6L8H2 238 aa6.86□□□□□ -1.31
ACTN4-208ENST00000497637 NDUFAF8A1L188 74 aa6.79□□□□□ -1.32
ACTN4-208ENST00000497637 KRTAP4-6Q9BYQ5 205 aa6.77□□□□□ -1.33
ACTN4-208ENST00000497637 MT1GP13640 62 aa6.76□□□□□ -1.33
ACTN4-208ENST00000497637 KRTAP5-4Q6L8H1 288 aa6.76□□□□□ -1.33
ACTN4-208ENST00000497637 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
ACTN4-208ENST00000497637 MT1MQ8N339 61 aa6.67□□□□□ -1.34
ACTN4-208ENST00000497637 KRTAP9-6A8MVA2 160 aa6.56□□□□□ -1.36
ACTN4-208ENST00000497637 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
ACTN4-208ENST00000497637 AHNAKQ09666 5890 aaKnown RBP6.44□□□□□ -1.38
ACTN4-208ENST00000497637 KRTAP20-2Q3LI61 65 aa6.43□□□□□ -1.38
ACTN4-208ENST00000497637 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
ACTN4-208ENST00000497637 MUC5ACP98088 5654 aa6.25□□□□□ -1.41
ACTN4-208ENST00000497637 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
ACTN4-208ENST00000497637 H3BS24 57 aa6.19□□□□□ -1.42
ACTN4-208ENST00000497637 MUC5BQ9HC84 5762 aaPredicted RBP6.16□□□□□ -1.42
ACTN4-208ENST00000497637 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
ACTN4-208ENST00000497637 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
ACTN4-208ENST00000497637 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
ACTN4-208ENST00000497637 MT1AP04731 61 aa5.95□□□□□ -1.46
ACTN4-208ENST00000497637 KRTAP5-8O75690 187 aa5.94□□□□□ -1.46
ACTN4-208ENST00000497637 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
ACTN4-208ENST00000497637 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
ACTN4-208ENST00000497637 KRTAP9-9Q9BYP9 154 aa5.83□□□□□ -1.48
ACTN4-208ENST00000497637 KRTAP5-2Q701N4 177 aa5.75□□□□□ -1.49
ACTN4-208ENST00000497637 INE1O15225 51 aa5.65□□□□□ -1.5
ACTN4-208ENST00000497637 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.5
ACTN4-208ENST00000497637 OBSCNQ5VST9 7968 aa5.64□□□□□ -1.51
ACTN4-208ENST00000497637 MT3P25713 68 aa5.38□□□□□ -1.55
ACTN4-208ENST00000497637 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
ACTN4-208ENST00000497637 KRTAP5-1Q6L8H4 278 aa5.32□□□□□ -1.56
ACTN4-208ENST00000497637 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
ACTN4-208ENST00000497637 LCE3EQ5T5B0 92 aa5.12□□□□□ -1.59
ACTN4-208ENST00000497637 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
ACTN4-208ENST00000497637 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
ACTN4-208ENST00000497637 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
ACTN4-208ENST00000497637 PRM1P04553 51 aa4.49□□□□□ -1.69
ACTN4-208ENST00000497637 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
ACTN4-208ENST00000497637 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
ACTN4-208ENST00000497637 KRTAP5-11Q6L8G4 156 aa4.31□□□□□ -1.72
ACTN4-208ENST00000497637 PHGR1C9JFL3 82 aa4.27□□□□□ -1.73
ACTN4-208ENST00000497637 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
ACTN4-208ENST00000497637 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
ACTN4-208ENST00000497637 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
ACTN4-208ENST00000497637 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
ACTN4-208ENST00000497637 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
ACTN4-208ENST00000497637 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
ACTN4-208ENST00000497637 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 43.8 ms