RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 KRTAP19-8Q3LI54 63 aa-0.11□□□□□ -2.43
VPS26A-208ENST00000497022 LEAP2Q969E1 77 aa-0.11□□□□□ -2.43
VPS26A-208ENST00000497022 ITPR2Q14571 2701 aa-0.11□□□□□ -2.43
VPS26A-208ENST00000497022 M0QZ58 72 aa-0.12□□□□□ -2.43
VPS26A-208ENST00000497022 UNC80Q8N2C7 3258 aa-0.12□□□□□ -2.43
VPS26A-208ENST00000497022 DOPEY1Q5JWR5 2465 aa-0.12□□□□□ -2.43
VPS26A-208ENST00000497022 XIRP2A4UGR9 3374 aa-0.12□□□□□ -2.43
VPS26A-208ENST00000497022 CEP250Q9BV73 2442 aa-0.13□□□□□ -2.43
VPS26A-208ENST00000497022 PCNTO95613 3336 aa-0.13□□□□□ -2.43
VPS26A-208ENST00000497022 DCHS1Q96JQ0 3298 aa-0.13□□□□□ -2.43
VPS26A-208ENST00000497022 SNRPGP62308 76 aaKnown RBP-0.14□□□□□ -2.43
VPS26A-208ENST00000497022 DEFB104AQ8WTQ1 72 aa-0.14□□□□□ -2.43
VPS26A-208ENST00000497022 CEP295Q9C0D2 2601 aa-0.14□□□□□ -2.43
VPS26A-208ENST00000497022 ASPMQ8IZT6 3477 aa-0.14□□□□□ -2.43
VPS26A-208ENST00000497022 MYO9AB2RTY4 2548 aa-0.15□□□□□ -2.43
VPS26A-208ENST00000497022 NEBP20929 6669 aa-0.15□□□□□ -2.43
VPS26A-208ENST00000497022 USP34Q70CQ2 3546 aa-0.15□□□□□ -2.43
VPS26A-208ENST00000497022 KRTAP20-2Q3LI61 65 aa-0.16□□□□□ -2.44
VPS26A-208ENST00000497022 FREM2Q5SZK8 3169 aa-0.17□□□□□ -2.44
VPS26A-208ENST00000497022 MT1HP80294 61 aa-0.17□□□□□ -2.44
VPS26A-208ENST00000497022 CEP350Q5VT06 3117 aa-0.18□□□□□ -2.44
VPS26A-208ENST00000497022 TLN1Q9Y490 2541 aaKnown RBP-0.18□□□□□ -2.44
VPS26A-208ENST00000497022 DEFB1P60022 68 aa-0.18□□□□□ -2.44
VPS26A-208ENST00000497022 TOMM7Q9P0U1 55 aa-0.19□□□□□ -2.44
VPS26A-208ENST00000497022 MT1EP04732 61 aa-0.2□□□□□ -2.44
VPS26A-208ENST00000497022 MT1GP13640 62 aa-0.2□□□□□ -2.44
VPS26A-208ENST00000497022 MT4P47944 62 aa-0.2□□□□□ -2.44
VPS26A-208ENST00000497022 MT1XP80297 61 aa-0.2□□□□□ -2.44
VPS26A-208ENST00000497022 CENPEQ02224 2701 aa-0.2□□□□□ -2.44
VPS26A-208ENST00000497022 SPART-AS1P0CW21 52 aa-0.21□□□□□ -2.44
VPS26A-208ENST00000497022 LOC400499M0QZD8 3231 aa-0.21□□□□□ -2.44
VPS26A-208ENST00000497022 MT1LQ93083 61 aa-0.22□□□□□ -2.44
VPS26A-208ENST00000497022 ARHGAP5-AS1Q96IT6 56 aa-0.22□□□□□ -2.44
VPS26A-208ENST00000497022 TTTY10Q9BZA0 68 aa-0.22□□□□□ -2.44
VPS26A-208ENST00000497022 CFAP47Q6ZTR5 3102 aa-0.23□□□□□ -2.45
VPS26A-208ENST00000497022 BRCA2P51587 3418 aa-0.23□□□□□ -2.45
VPS26A-208ENST00000497022 SPEGQ15772 3267 aa-0.24□□□□□ -2.45
VPS26A-208ENST00000497022 VCANP13611 3396 aa-0.24□□□□□ -2.45
VPS26A-208ENST00000497022 EP400Q96L91 3159 aa-0.24□□□□□ -2.45
VPS26A-208ENST00000497022 DNAH14Q0VDD8 3507 aa-0.25□□□□□ -2.45
VPS26A-208ENST00000497022 H3BSH0 61 aa-0.25□□□□□ -2.45
VPS26A-208ENST00000497022 DEFB4AO15263 64 aa-0.25□□□□□ -2.45
VPS26A-208ENST00000497022 LINC01590Q5TEZ4 76 aa-0.27□□□□□ -2.45
VPS26A-208ENST00000497022 UTRNP46939 3433 aa-0.28□□□□□ -2.45
VPS26A-208ENST00000497022 A0A096LNI7 61 aa-0.28□□□□□ -2.45
VPS26A-208ENST00000497022 MT1MQ8N339 61 aa-0.28□□□□□ -2.45
VPS26A-208ENST00000497022 VPS13AQ96RL7 3174 aa-0.29□□□□□ -2.46
VPS26A-208ENST00000497022 DEFB136Q30KP8 78 aa-0.29□□□□□ -2.46
VPS26A-208ENST00000497022 PRCDQ00LT1 54 aa-0.3□□□□□ -2.46
VPS26A-208ENST00000497022 MT2AP02795 61 aa-0.32□□□□□ -2.46
VPS26A-208ENST00000497022 CENPFP49454 3210 aa-0.33□□□□□ -2.46
VPS26A-208ENST00000497022 K7EIM0 57 aa-0.33□□□□□ -2.46
VPS26A-208ENST00000497022 MT1BP07438 61 aa-0.34□□□□□ -2.46
VPS26A-208ENST00000497022 DEFB124Q8NES8 71 aa-0.34□□□□□ -2.46
VPS26A-208ENST00000497022 RPL39P5Q59GN2 51 aa-0.35□□□□□ -2.47
VPS26A-208ENST00000497022 TMEM167AQ8TBQ9 72 aa-0.36□□□□□ -2.47
VPS26A-208ENST00000497022 RHPN1-AS1Q9BWJ2 59 aa-0.36□□□□□ -2.47
VPS26A-208ENST00000497022 CDH23Q9H251 3354 aa-0.36□□□□□ -2.47
VPS26A-208ENST00000497022 MT1HL1P0DM35 61 aa-0.37□□□□□ -2.47
VPS26A-208ENST00000497022 HTN1P15515 57 aa-0.38□□□□□ -2.47
VPS26A-208ENST00000497022 KRTAP19-2Q3LHN2 52 aa-0.38□□□□□ -2.47
VPS26A-208ENST00000497022 DEFB133Q30KQ1 61 aa-0.39□□□□□ -2.47
VPS26A-208ENST00000497022 DEFB108AA8MXU0 73 aa-0.4□□□□□ -2.47
VPS26A-208ENST00000497022 APELAP0DMC3 54 aa-0.4□□□□□ -2.47
VPS26A-208ENST00000497022 RPS29P62273 56 aaKnown RBP-0.42□□□□□ -2.48
VPS26A-208ENST00000497022 H3BUX3 64 aa-0.43□□□□□ -2.48
VPS26A-208ENST00000497022 GOLGB1Q14789 3259 aaKnown RBP-0.44□□□□□ -2.48
VPS26A-208ENST00000497022 A0A096LPF7 62 aa-0.44□□□□□ -2.48
VPS26A-208ENST00000497022 MT1FP04733 61 aa-0.44□□□□□ -2.48
VPS26A-208ENST00000497022 KRTAP20-1Q3LI63 56 aa-0.44□□□□□ -2.48
VPS26A-208ENST00000497022 LINC01556Q5JQF7 62 aa-0.47□□□□□ -2.48
VPS26A-208ENST00000497022 KRTAP19-6Q3LI70 58 aa-0.52□□□□□ -2.49
VPS26A-208ENST00000497022 CD52P31358 61 aa-0.55□□□□□ -2.5
VPS26A-208ENST00000497022 STATHP02808 62 aa-0.56□□□□□ -2.5
VPS26A-208ENST00000497022 HTN3P15516 51 aa-0.59□□□□□ -2.5
VPS26A-208ENST00000497022 DEFB108BQ8NET1 73 aa-0.59□□□□□ -2.5
VPS26A-208ENST00000497022 COX14Q96I36 57 aa-0.72□□□□□ -2.52
VPS26A-208ENST00000497022 Q9Y3F1 56 aa-0.74□□□□□ -2.53
Retrieved 78 of 20,778 RNA–protein pairs in 84.5 ms