RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 UBL5Q9BZL1 73 aa0.5□□□□□ -2.33
UBR4-217ENST00000497018 ETDCA0A1B0GVM5 59 aa0.49□□□□□ -2.33
UBR4-217ENST00000497018 K7EMI3 77 aa0.49□□□□□ -2.33
UBR4-217ENST00000497018 RPL38P63173 70 aaKnown RBP0.49□□□□□ -2.33
UBR4-217ENST00000497018 TMEM167AQ8TBQ9 72 aa0.49□□□□□ -2.33
UBR4-217ENST00000497018 IGIPA6NJ69 53 aa0.48□□□□□ -2.33
UBR4-217ENST00000497018 A0A096LNI7 61 aa0.47□□□□□ -2.33
UBR4-217ENST00000497018 C9orf92A6NGG3 77 aa0.47□□□□□ -2.33
UBR4-217ENST00000497018 PRCDQ00LT1 54 aa0.47□□□□□ -2.33
UBR4-217ENST00000497018 CDKN2A-AS1Q9UH64 79 aa0.47□□□□□ -2.33
UBR4-217ENST00000497018 SNRPGP15A8MWD9 76 aa0.46□□□□□ -2.34
UBR4-217ENST00000497018 H0YAA0 97 aa0.46□□□□□ -2.34
UBR4-217ENST00000497018 MT1BP07438 61 aa0.46□□□□□ -2.34
UBR4-217ENST00000497018 H1FX-AS1Q4G0G2 97 aa0.46□□□□□ -2.34
UBR4-217ENST00000497018 KRTAP19-3Q7Z4W3 81 aa0.46□□□□□ -2.34
UBR4-217ENST00000497018 FCER1GP30273 86 aa0.45□□□□□ -2.34
UBR4-217ENST00000497018 DEFB105AQ8NG35 78 aa0.45□□□□□ -2.34
UBR4-217ENST00000497018 SPINK1P00995 79 aa0.44□□□□□ -2.34
UBR4-217ENST00000497018 LINC00158P58513 81 aa0.44□□□□□ -2.34
UBR4-217ENST00000497018 KLK9Q2XQG4 91 aa0.44□□□□□ -2.34
UBR4-217ENST00000497018 WFDC13Q8IUB5 93 aa0.44□□□□□ -2.34
UBR4-217ENST00000497018 FXYD6Q9H0Q3 95 aa0.44□□□□□ -2.34
UBR4-217ENST00000497018 MUC19Q7Z5P9 8384 aa0.43□□□□□ -2.34
UBR4-217ENST00000497018 DEFB1P60022 68 aa0.43□□□□□ -2.34
UBR4-217ENST00000497018 NMES1Q9C002 83 aa0.43□□□□□ -2.34
UBR4-217ENST00000497018 RPL39P5Q59GN2 51 aa0.42□□□□□ -2.34
UBR4-217ENST00000497018 SPINK4O60575 86 aa0.41□□□□□ -2.34
UBR4-217ENST00000497018 RPS27P42677 84 aaKnown RBP0.41□□□□□ -2.34
UBR4-217ENST00000497018 KRTAP19-8Q3LI54 63 aa0.41□□□□□ -2.34
UBR4-217ENST00000497018 CLPSL2Q6UWE3 100 aa0.41□□□□□ -2.34
UBR4-217ENST00000497018 SYNE1Q8NF91 8797 aaKnown RBP0.4□□□□□ -2.35
UBR4-217ENST00000497018 A8MTW9 85 aa0.4□□□□□ -2.35
UBR4-217ENST00000497018 RPS29P62273 56 aaKnown RBP0.4□□□□□ -2.35
UBR4-217ENST00000497018 SERF2P84101 59 aa0.4□□□□□ -2.35
UBR4-217ENST00000497018 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
UBR4-217ENST00000497018 CMC2Q9NRP2 79 aa0.4□□□□□ -2.35
UBR4-217ENST00000497018 LINC01546A6NGU7 62 aa0.39□□□□□ -2.35
UBR4-217ENST00000497018 KRTAP21-2Q3LI59 83 aa0.39□□□□□ -2.35
UBR4-217ENST00000497018 ABRACLQ9P1F3 81 aa0.39□□□□□ -2.35
UBR4-217ENST00000497018 H0YGX0 51 aa0.38□□□□□ -2.35
UBR4-217ENST00000497018 K7EIM0 57 aa0.38□□□□□ -2.35
UBR4-217ENST00000497018 SMIM27A0A1W2PRY6 76 aa0.37□□□□□ -2.35
UBR4-217ENST00000497018 IAPPP10997 89 aa0.37□□□□□ -2.35
UBR4-217ENST00000497018 MT1GP13640 62 aa0.37□□□□□ -2.35
UBR4-217ENST00000497018 PLNP26678 52 aa0.37□□□□□ -2.35
UBR4-217ENST00000497018 SNRPGP62308 76 aaKnown RBP0.36□□□□□ -2.35
UBR4-217ENST00000497018 MT1MQ8N339 61 aa0.36□□□□□ -2.35
UBR4-217ENST00000497018 LINC00308Q8TCZ7 52 aa0.36□□□□□ -2.35
UBR4-217ENST00000497018 SPRR2GQ9BYE4 73 aa0.36□□□□□ -2.35
UBR4-217ENST00000497018 MT1XP80297 61 aa0.35□□□□□ -2.35
UBR4-217ENST00000497018 WT1-ASQ06250 92 aa0.35□□□□□ -2.35
UBR4-217ENST00000497018 MT1EP04732 61 aa0.34□□□□□ -2.36
UBR4-217ENST00000497018 TOMM5Q8N4H5 51 aa0.34□□□□□ -2.36
UBR4-217ENST00000497018 TMEM167BQ9NRX6 74 aa0.34□□□□□ -2.36
UBR4-217ENST00000497018 C6orf48Q9UBA6 75 aa0.34□□□□□ -2.36
UBR4-217ENST00000497018 PRLHP81277 87 aa0.33□□□□□ -2.36
UBR4-217ENST00000497018 ARHGAP5-AS1Q96IT6 56 aa0.33□□□□□ -2.36
UBR4-217ENST00000497018 PRM1P04553 51 aa0.32□□□□□ -2.36
UBR4-217ENST00000497018 S4R3F8 94 aa0.32□□□□□ -2.36
UBR4-217ENST00000497018 KRTAP19-7Q3SYF9 63 aa0.31□□□□□ -2.36
UBR4-217ENST00000497018 MUC16Q8WXI7 14507 aa0.3□□□□□ -2.36
UBR4-217ENST00000497018 NDUFA1O15239 70 aa0.3□□□□□ -2.36
UBR4-217ENST00000497018 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
UBR4-217ENST00000497018 LINC01590Q5TEZ4 76 aa0.3□□□□□ -2.36
UBR4-217ENST00000497018 MT1LQ93083 61 aa0.27□□□□□ -2.37
UBR4-217ENST00000497018 SMIM2Q9BVW6 85 aa0.27□□□□□ -2.37
UBR4-217ENST00000497018 KRTAP19-5Q3LI72 72 aa0.25□□□□□ -2.37
UBR4-217ENST00000497018 IGLV5-48A0A075B6I7 105 aa0.24□□□□□ -2.37
UBR4-217ENST00000497018 MT1AP04731 61 aa0.24□□□□□ -2.37
UBR4-217ENST00000497018 KRTAP6-1Q3LI64 71 aa0.24□□□□□ -2.37
UBR4-217ENST00000497018 MMP24-AS1A0A0U1RRL7 71 aa0.22□□□□□ -2.37
UBR4-217ENST00000497018 TOMM7Q9P0U1 55 aa0.2□□□□□ -2.38
UBR4-217ENST00000497018 M0QY20 66 aa0.16□□□□□ -2.38
UBR4-217ENST00000497018 M0QZ58 72 aa0.16□□□□□ -2.38
UBR4-217ENST00000497018 POLR2KP53803 58 aaKnown RBP0.13□□□□□ -2.39
UBR4-217ENST00000497018 RPL39LQ96EH5 51 aaKnown RBP0.12□□□□□ -2.39
UBR4-217ENST00000497018 TNP1P09430 55 aa0.11□□□□□ -2.39
UBR4-217ENST00000497018 RPL39P62891 51 aaKnown RBP0.1□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms