RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
SH3D21-204ENST00000496636 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
SH3D21-204ENST00000496636 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
SH3D21-204ENST00000496636 PRO0628Q9UI54 55 aa3.7□□□□□ -1.82
SH3D21-204ENST00000496636 K7ERS5 55 aa3.69□□□□□ -1.82
SH3D21-204ENST00000496636 MT4P47944 62 aa3.68□□□□□ -1.82
SH3D21-204ENST00000496636 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
SH3D21-204ENST00000496636 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.83
SH3D21-204ENST00000496636 MT1EP04732 61 aa3.62□□□□□ -1.83
SH3D21-204ENST00000496636 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
SH3D21-204ENST00000496636 PMAIP1Q13794 54 aa3.61□□□□□ -1.83
SH3D21-204ENST00000496636 CAMK2N1Q7Z7J9 78 aa3.61□□□□□ -1.83
SH3D21-204ENST00000496636 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
SH3D21-204ENST00000496636 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
SH3D21-204ENST00000496636 MT1GP13640 62 aa3.55□□□□□ -1.84
SH3D21-204ENST00000496636 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
SH3D21-204ENST00000496636 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
SH3D21-204ENST00000496636 ROMO1P60602 79 aa3.54□□□□□ -1.84
SH3D21-204ENST00000496636 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
SH3D21-204ENST00000496636 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
SH3D21-204ENST00000496636 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
SH3D21-204ENST00000496636 MT1MQ8N339 61 aa3.47□□□□□ -1.85
SH3D21-204ENST00000496636 TNP1P09430 55 aa3.43□□□□□ -1.86
SH3D21-204ENST00000496636 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
SH3D21-204ENST00000496636 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
SH3D21-204ENST00000496636 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
SH3D21-204ENST00000496636 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
SH3D21-204ENST00000496636 PRAC1Q96KF2 57 aa3.4□□□□□ -1.87
SH3D21-204ENST00000496636 MT1LQ93083 61 aa3.39□□□□□ -1.87
SH3D21-204ENST00000496636 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
SH3D21-204ENST00000496636 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
SH3D21-204ENST00000496636 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
SH3D21-204ENST00000496636 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
SH3D21-204ENST00000496636 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
SH3D21-204ENST00000496636 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
SH3D21-204ENST00000496636 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
SH3D21-204ENST00000496636 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
SH3D21-204ENST00000496636 SVIPQ8NHG7 77 aa3.24□□□□□ -1.89
SH3D21-204ENST00000496636 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
SH3D21-204ENST00000496636 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
SH3D21-204ENST00000496636 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
SH3D21-204ENST00000496636 KRTAP4-7Q9BYR0 210 aa3.14□□□□□ -1.91
SH3D21-204ENST00000496636 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
SH3D21-204ENST00000496636 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
SH3D21-204ENST00000496636 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
SH3D21-204ENST00000496636 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
SH3D21-204ENST00000496636 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
SH3D21-204ENST00000496636 KRTAP19-4Q3LI73 84 aa2.97□□□□□ -1.93
SH3D21-204ENST00000496636 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
SH3D21-204ENST00000496636 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
SH3D21-204ENST00000496636 MT1AP04731 61 aa2.89□□□□□ -1.95
SH3D21-204ENST00000496636 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
SH3D21-204ENST00000496636 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
SH3D21-204ENST00000496636 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
SH3D21-204ENST00000496636 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
SH3D21-204ENST00000496636 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
SH3D21-204ENST00000496636 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
SH3D21-204ENST00000496636 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
SH3D21-204ENST00000496636 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
SH3D21-204ENST00000496636 MT3P25713 68 aa2.67□□□□□ -1.98
SH3D21-204ENST00000496636 LCE1EQ5T753 118 aa2.57□□□□□ -2
SH3D21-204ENST00000496636 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
SH3D21-204ENST00000496636 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
SH3D21-204ENST00000496636 A0A0A0MQY5 61 aa2.31□□□□□ -2.04
SH3D21-204ENST00000496636 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
SH3D21-204ENST00000496636 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
SH3D21-204ENST00000496636 H3BS24 57 aa2.22□□□□□ -2.05
SH3D21-204ENST00000496636 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
SH3D21-204ENST00000496636 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
SH3D21-204ENST00000496636 INE1O15225 51 aa2.19□□□□□ -2.06
SH3D21-204ENST00000496636 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
SH3D21-204ENST00000496636 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
SH3D21-204ENST00000496636 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
SH3D21-204ENST00000496636 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
SH3D21-204ENST00000496636 PRM1P04553 51 aa1.85□□□□□ -2.11
SH3D21-204ENST00000496636 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
SH3D21-204ENST00000496636 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SH3D21-204ENST00000496636 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 142 ms