RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 KRTAP13-4Q3LI77 160 aa3.05□□□□□ -1.92
CDHR3-214ENST00000496633 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
CDHR3-214ENST00000496633 KRTAP10-12P60413 245 aa3.04□□□□□ -1.92
CDHR3-214ENST00000496633 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
CDHR3-214ENST00000496633 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
CDHR3-214ENST00000496633 NEBP20929 6669 aa3.02□□□□□ -1.93
CDHR3-214ENST00000496633 A0A0D9SG42 100 aa3.02□□□□□ -1.93
CDHR3-214ENST00000496633 LCE1AQ5T7P2 110 aa3.02□□□□□ -1.93
CDHR3-214ENST00000496633 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
CDHR3-214ENST00000496633 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
CDHR3-214ENST00000496633 KMT2DO14686 5537 aa3.01□□□□□ -1.93
CDHR3-214ENST00000496633 SPRR2EP22531 72 aa2.99□□□□□ -1.93
CDHR3-214ENST00000496633 SPRR2BP35325 72 aa2.99□□□□□ -1.93
CDHR3-214ENST00000496633 SPRR2AP35326 72 aa2.99□□□□□ -1.93
CDHR3-214ENST00000496633 KRTAP10-7P60409 375 aaPredicted RBP2.99□□□□□ -1.93
CDHR3-214ENST00000496633 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
CDHR3-214ENST00000496633 KRTAP12-1P59990 96 aa2.97□□□□□ -1.93
CDHR3-214ENST00000496633 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
CDHR3-214ENST00000496633 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
CDHR3-214ENST00000496633 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
CDHR3-214ENST00000496633 ROMO1P60602 79 aa2.95□□□□□ -1.94
CDHR3-214ENST00000496633 TNP1P09430 55 aa2.91□□□□□ -1.94
CDHR3-214ENST00000496633 SPRR2DP22532 72 aa2.9□□□□□ -1.95
CDHR3-214ENST00000496633 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
CDHR3-214ENST00000496633 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
CDHR3-214ENST00000496633 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
CDHR3-214ENST00000496633 PP632Q6XCG6 107 aa2.82□□□□□ -1.96
CDHR3-214ENST00000496633 C10orf95Q9H7T3 257 aa2.82□□□□□ -1.96
CDHR3-214ENST00000496633 MT1EP04732 61 aa2.81□□□□□ -1.96
CDHR3-214ENST00000496633 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
CDHR3-214ENST00000496633 MT1GP13640 62 aa2.79□□□□□ -1.96
CDHR3-214ENST00000496633 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
CDHR3-214ENST00000496633 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
CDHR3-214ENST00000496633 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
CDHR3-214ENST00000496633 DSTQ03001 7570 aaKnown RBP2.71□□□□□ -1.98
CDHR3-214ENST00000496633 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
CDHR3-214ENST00000496633 MT1LQ93083 61 aa2.69□□□□□ -1.98
CDHR3-214ENST00000496633 MT1MQ8N339 61 aa2.67□□□□□ -1.98
CDHR3-214ENST00000496633 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -1.99
CDHR3-214ENST00000496633 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
CDHR3-214ENST00000496633 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
CDHR3-214ENST00000496633 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
CDHR3-214ENST00000496633 MT4P47944 62 aa2.48□□□□□ -2.01
CDHR3-214ENST00000496633 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
CDHR3-214ENST00000496633 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
CDHR3-214ENST00000496633 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
CDHR3-214ENST00000496633 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
CDHR3-214ENST00000496633 INE1O15225 51 aa2.38□□□□□ -2.03
CDHR3-214ENST00000496633 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
CDHR3-214ENST00000496633 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
CDHR3-214ENST00000496633 MT1AP04731 61 aa2.32□□□□□ -2.04
CDHR3-214ENST00000496633 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
CDHR3-214ENST00000496633 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
CDHR3-214ENST00000496633 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
CDHR3-214ENST00000496633 KRTAP9-6A8MVA2 160 aa2.24□□□□□ -2.05
CDHR3-214ENST00000496633 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
CDHR3-214ENST00000496633 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
CDHR3-214ENST00000496633 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
CDHR3-214ENST00000496633 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
CDHR3-214ENST00000496633 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
CDHR3-214ENST00000496633 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
CDHR3-214ENST00000496633 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
CDHR3-214ENST00000496633 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
CDHR3-214ENST00000496633 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
CDHR3-214ENST00000496633 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
CDHR3-214ENST00000496633 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
CDHR3-214ENST00000496633 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
CDHR3-214ENST00000496633 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
CDHR3-214ENST00000496633 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
CDHR3-214ENST00000496633 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
CDHR3-214ENST00000496633 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
CDHR3-214ENST00000496633 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
CDHR3-214ENST00000496633 PRM1P04553 51 aa1.52□□□□□ -2.17
CDHR3-214ENST00000496633 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
CDHR3-214ENST00000496633 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
CDHR3-214ENST00000496633 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
CDHR3-214ENST00000496633 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
CDHR3-214ENST00000496633 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 61.9 ms