RNA–Protein interactions for RNA: ENST00000494538.6

CBWD6-208, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-208ENST00000494538 KRTAP8-1Q8IUC2 63 aa4.98□□□□□ -1.61
CBWD6-208ENST00000494538 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
CBWD6-208ENST00000494538 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
CBWD6-208ENST00000494538 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
CBWD6-208ENST00000494538 KRTAP6-3Q3LI67 103 aa4.86□□□□□ -1.63
CBWD6-208ENST00000494538 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
CBWD6-208ENST00000494538 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
CBWD6-208ENST00000494538 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
CBWD6-208ENST00000494538 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
CBWD6-208ENST00000494538 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
CBWD6-208ENST00000494538 KTN1-AS1Q86SY8 53 aa4.81□□□□□ -1.64
CBWD6-208ENST00000494538 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
CBWD6-208ENST00000494538 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
CBWD6-208ENST00000494538 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
CBWD6-208ENST00000494538 MT1EP04732 61 aa4.74□□□□□ -1.65
CBWD6-208ENST00000494538 MDN1Q9NU22 5596 aa4.71□□□□□ -1.66
CBWD6-208ENST00000494538 SPRR2EP22531 72 aa4.67□□□□□ -1.66
CBWD6-208ENST00000494538 SPRR2BP35325 72 aa4.67□□□□□ -1.66
CBWD6-208ENST00000494538 SPRR2AP35326 72 aa4.67□□□□□ -1.66
CBWD6-208ENST00000494538 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
CBWD6-208ENST00000494538 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
CBWD6-208ENST00000494538 MT1LQ93083 61 aa4.62□□□□□ -1.67
CBWD6-208ENST00000494538 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
CBWD6-208ENST00000494538 NEBP20929 6669 aa4.57□□□□□ -1.68
CBWD6-208ENST00000494538 MT1GP13640 62 aa4.56□□□□□ -1.68
CBWD6-208ENST00000494538 SPRR2DP22532 72 aa4.5□□□□□ -1.69
CBWD6-208ENST00000494538 MT1MQ8N339 61 aa4.49□□□□□ -1.69
CBWD6-208ENST00000494538 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
CBWD6-208ENST00000494538 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
CBWD6-208ENST00000494538 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
CBWD6-208ENST00000494538 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
CBWD6-208ENST00000494538 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
CBWD6-208ENST00000494538 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
CBWD6-208ENST00000494538 KRTAP2-3P0C7H8 128 aa4.3□□□□□ -1.72
CBWD6-208ENST00000494538 KRTAP2-4Q9BYR9 128 aa4.3□□□□□ -1.72
CBWD6-208ENST00000494538 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
CBWD6-208ENST00000494538 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
CBWD6-208ENST00000494538 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
CBWD6-208ENST00000494538 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
CBWD6-208ENST00000494538 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
CBWD6-208ENST00000494538 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
CBWD6-208ENST00000494538 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
CBWD6-208ENST00000494538 MT1AP04731 61 aa3.93□□□□□ -1.78
CBWD6-208ENST00000494538 MT4P47944 62 aa3.93□□□□□ -1.78
CBWD6-208ENST00000494538 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
CBWD6-208ENST00000494538 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
CBWD6-208ENST00000494538 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
CBWD6-208ENST00000494538 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
CBWD6-208ENST00000494538 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
CBWD6-208ENST00000494538 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
CBWD6-208ENST00000494538 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
CBWD6-208ENST00000494538 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
CBWD6-208ENST00000494538 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.82
CBWD6-208ENST00000494538 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
CBWD6-208ENST00000494538 MT3P25713 68 aa3.58□□□□□ -1.84
CBWD6-208ENST00000494538 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
CBWD6-208ENST00000494538 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
CBWD6-208ENST00000494538 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
CBWD6-208ENST00000494538 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
CBWD6-208ENST00000494538 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
CBWD6-208ENST00000494538 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
CBWD6-208ENST00000494538 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
CBWD6-208ENST00000494538 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
CBWD6-208ENST00000494538 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
CBWD6-208ENST00000494538 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
CBWD6-208ENST00000494538 INE1O15225 51 aa3.03□□□□□ -1.93
CBWD6-208ENST00000494538 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
CBWD6-208ENST00000494538 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
CBWD6-208ENST00000494538 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
CBWD6-208ENST00000494538 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
CBWD6-208ENST00000494538 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
CBWD6-208ENST00000494538 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
CBWD6-208ENST00000494538 PRM1P04553 51 aa2.68□□□□□ -1.98
CBWD6-208ENST00000494538 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
CBWD6-208ENST00000494538 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
CBWD6-208ENST00000494538 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
CBWD6-208ENST00000494538 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
CBWD6-208ENST00000494538 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 59.5 ms