RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 TNP1P09430 55 aa4.77□□□□□ -1.65
TRA2A-209ENST00000494255 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
TRA2A-209ENST00000494255 MUC12Q9UKN1 5478 aa4.76□□□□□ -1.65
TRA2A-209ENST00000494255 NEBP20929 6669 aa4.76□□□□□ -1.65
TRA2A-209ENST00000494255 A0A0A0MQY5 61 aa4.76□□□□□ -1.65
TRA2A-209ENST00000494255 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
TRA2A-209ENST00000494255 MDN1Q9NU22 5596 aa4.69□□□□□ -1.66
TRA2A-209ENST00000494255 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.66
TRA2A-209ENST00000494255 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
TRA2A-209ENST00000494255 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
TRA2A-209ENST00000494255 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
TRA2A-209ENST00000494255 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
TRA2A-209ENST00000494255 MT1EP04732 61 aa4.61□□□□□ -1.67
TRA2A-209ENST00000494255 SPRR2DP22532 72 aa4.61□□□□□ -1.67
TRA2A-209ENST00000494255 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
TRA2A-209ENST00000494255 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
TRA2A-209ENST00000494255 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
TRA2A-209ENST00000494255 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
TRA2A-209ENST00000494255 ROMO1P60602 79 aa4.49□□□□□ -1.69
TRA2A-209ENST00000494255 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
TRA2A-209ENST00000494255 MT1GP13640 62 aa4.46□□□□□ -1.7
TRA2A-209ENST00000494255 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
TRA2A-209ENST00000494255 MT1LQ93083 61 aa4.45□□□□□ -1.7
TRA2A-209ENST00000494255 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
TRA2A-209ENST00000494255 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
TRA2A-209ENST00000494255 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
TRA2A-209ENST00000494255 BRK1Q8WUW1 75 aa4.38□□□□□ -1.71
TRA2A-209ENST00000494255 MT1MQ8N339 61 aa4.38□□□□□ -1.71
TRA2A-209ENST00000494255 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
TRA2A-209ENST00000494255 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
TRA2A-209ENST00000494255 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
TRA2A-209ENST00000494255 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
TRA2A-209ENST00000494255 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
TRA2A-209ENST00000494255 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
TRA2A-209ENST00000494255 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
TRA2A-209ENST00000494255 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
TRA2A-209ENST00000494255 MT4P47944 62 aa4□□□□□ -1.77
TRA2A-209ENST00000494255 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
TRA2A-209ENST00000494255 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
TRA2A-209ENST00000494255 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
TRA2A-209ENST00000494255 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
TRA2A-209ENST00000494255 HMCN1Q96RW7 5635 aa3.84□□□□□ -1.79
TRA2A-209ENST00000494255 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
TRA2A-209ENST00000494255 MT1AP04731 61 aa3.8□□□□□ -1.8
TRA2A-209ENST00000494255 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
TRA2A-209ENST00000494255 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
TRA2A-209ENST00000494255 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
TRA2A-209ENST00000494255 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
TRA2A-209ENST00000494255 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
TRA2A-209ENST00000494255 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
TRA2A-209ENST00000494255 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.84
TRA2A-209ENST00000494255 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
TRA2A-209ENST00000494255 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
TRA2A-209ENST00000494255 MT3P25713 68 aa3.48□□□□□ -1.85
TRA2A-209ENST00000494255 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
TRA2A-209ENST00000494255 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
TRA2A-209ENST00000494255 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
TRA2A-209ENST00000494255 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
TRA2A-209ENST00000494255 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
TRA2A-209ENST00000494255 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
TRA2A-209ENST00000494255 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
TRA2A-209ENST00000494255 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
TRA2A-209ENST00000494255 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
TRA2A-209ENST00000494255 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
TRA2A-209ENST00000494255 MUC5ACP98088 5654 aa3□□□□□ -1.93
TRA2A-209ENST00000494255 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
TRA2A-209ENST00000494255 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
TRA2A-209ENST00000494255 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
TRA2A-209ENST00000494255 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
TRA2A-209ENST00000494255 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
TRA2A-209ENST00000494255 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
TRA2A-209ENST00000494255 INE1O15225 51 aa2.51□□□□□ -2.01
TRA2A-209ENST00000494255 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
TRA2A-209ENST00000494255 PRM1P04553 51 aa2.3□□□□□ -2.04
TRA2A-209ENST00000494255 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
TRA2A-209ENST00000494255 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
TRA2A-209ENST00000494255 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
TRA2A-209ENST00000494255 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 253.5 ms