RNA–Protein interactions for RNA: ENST00000494163.1

IFT172-215, Transcript of intraflagellar transport 172, human

TSL 3

Gene IFT172, Length 607 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT172-215	ENST00000494163	LCE5A	Q5TCM9	118 aa		5.2	□□□□□ -1.58
IFT172-215	ENST00000494163	ROMO1	P60602	79 aa		5.17	□□□□□ -1.58
IFT172-215	ENST00000494163		H3BS24	57 aa		5.15	□□□□□ -1.59
IFT172-215	ENST00000494163	MT1G	P13640	62 aa		5.15	□□□□□ -1.59
IFT172-215	ENST00000494163	KRTAP12-3	P60328	96 aa		5.15	□□□□□ -1.59
IFT172-215	ENST00000494163	MT1L	Q93083	61 aa		5.14	□□□□□ -1.59
IFT172-215	ENST00000494163	LCE3B	Q5TA77	95 aa		5.13	□□□□□ -1.59
IFT172-215	ENST00000494163	KRTAP23-1	A1A580	65 aa		5.12	□□□□□ -1.59
IFT172-215	ENST00000494163	KRTAP2-2	Q9BYT5	123 aa		5.12	□□□□□ -1.59
IFT172-215	ENST00000494163	KRTAP2-1	Q9BYU5	128 aa		5.12	□□□□□ -1.59
IFT172-215	ENST00000494163	PP632	Q6XCG6	107 aa		5.11	□□□□□ -1.59
IFT172-215	ENST00000494163	MT1M	Q8N339	61 aa		5.05	□□□□□ -1.6
IFT172-215	ENST00000494163	BRK1	Q8WUW1	75 aa		5.03	□□□□□ -1.6
IFT172-215	ENST00000494163	DST	Q03001	7570 aa	Known RBP	5.02	□□□□□ -1.61
IFT172-215	ENST00000494163	KRTAP4-3	Q9BYR4	195 aa		4.92	□□□□□ -1.62
IFT172-215	ENST00000494163	KRTAP15-1	Q3LI76	137 aa		4.9	□□□□□ -1.63
IFT172-215	ENST00000494163	KRTAP4-7	Q9BYR0	210 aa		4.9	□□□□□ -1.63
IFT172-215	ENST00000494163	KRTAP19-4	Q3LI73	84 aa		4.89	□□□□□ -1.63
IFT172-215	ENST00000494163	LOC100996750	A0A140TA64	210 aa		4.79	□□□□□ -1.64
IFT172-215	ENST00000494163	KRTAP4-6	Q9BYQ5	205 aa		4.79	□□□□□ -1.64
IFT172-215	ENST00000494163	LCE3C	Q5T5A8	94 aa		4.76	□□□□□ -1.65
IFT172-215	ENST00000494163	PMAIP1	Q13794	54 aa		4.74	□□□□□ -1.65
IFT172-215	ENST00000494163	SVIP	Q8NHG7	77 aa		4.73	□□□□□ -1.65
IFT172-215	ENST00000494163	LCE4A	Q5TA78	99 aa		4.71	□□□□□ -1.66
IFT172-215	ENST00000494163	KRTAP4-9	Q9BYQ8	210 aa		4.69	□□□□□ -1.66
IFT172-215	ENST00000494163	KRTAP5-4	Q6L8H1	288 aa		4.66	□□□□□ -1.66
IFT172-215	ENST00000494163	PRO0628	Q9UI54	55 aa		4.62	□□□□□ -1.67
IFT172-215	ENST00000494163	LCE1D	Q5T752	114 aa		4.61	□□□□□ -1.67
IFT172-215	ENST00000494163	MT4	P47944	62 aa		4.6	□□□□□ -1.67
IFT172-215	ENST00000494163	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.6	□□□□□ -1.67
IFT172-215	ENST00000494163	HMCN1	Q96RW7	5635 aa		4.57	□□□□□ -1.68
IFT172-215	ENST00000494163	GPR98	Q8WXG9	6306 aa		4.54	□□□□□ -1.68
IFT172-215	ENST00000494163	PRAC1	Q96KF2	57 aa		4.5	□□□□□ -1.69
IFT172-215	ENST00000494163	KRTAP9-6	A8MVA2	160 aa		4.48	□□□□□ -1.69
IFT172-215	ENST00000494163	SYNE1	Q8NF91	8797 aa	Known RBP	4.48	□□□□□ -1.69
IFT172-215	ENST00000494163	KRTAP12-4	P60329	112 aa		4.43	□□□□□ -1.7
IFT172-215	ENST00000494163	SPRR5	A0A1B0GTR4	108 aa		4.4	□□□□□ -1.71
IFT172-215	ENST00000494163	MT1A	P04731	61 aa		4.38	□□□□□ -1.71
IFT172-215	ENST00000494163	KRTAP20-2	Q3LI61	65 aa		4.38	□□□□□ -1.71
IFT172-215	ENST00000494163	KTN1-AS1	Q86SY8	53 aa		4.35	□□□□□ -1.71
IFT172-215	ENST00000494163	KRTAP6-1	Q3LI64	71 aa		4.33	□□□□□ -1.72
IFT172-215	ENST00000494163	AHNAK2	Q8IVF2	5795 aa		4.31	□□□□□ -1.72
IFT172-215	ENST00000494163	KRTAP5-3	Q6L8H2	238 aa		4.24	□□□□□ -1.73
IFT172-215	ENST00000494163	KRTAP9-4	Q9BYQ2	154 aa		4.21	□□□□□ -1.74
IFT172-215	ENST00000494163	KRTAP5-10	Q6L8G5	202 aa		4.14	□□□□□ -1.75
IFT172-215	ENST00000494163	KRTAP5-2	Q701N4	177 aa		4.13	□□□□□ -1.75
IFT172-215	ENST00000494163	KRTAP6-2	Q3LI66	62 aa		4.09	□□□□□ -1.75
IFT172-215	ENST00000494163	MT3	P25713	68 aa		4.01	□□□□□ -1.77
IFT172-215	ENST00000494163	KRTAP5-7	Q6L8G8	165 aa		3.96	□□□□□ -1.78
IFT172-215	ENST00000494163	KRTAP4-12	Q9BQ66	201 aa		3.96	□□□□□ -1.78
IFT172-215	ENST00000494163		A0A0A0MQY5	61 aa		3.93	□□□□□ -1.78
IFT172-215	ENST00000494163	KRTAP9-9	Q9BYP9	154 aa		3.93	□□□□□ -1.78
IFT172-215	ENST00000494163	KRTAP4-11	Q9BYQ6	195 aa		3.93	□□□□□ -1.78
IFT172-215	ENST00000494163	OBSCN	Q5VST9	7968 aa		3.83	□□□□□ -1.8
IFT172-215	ENST00000494163	KRTAP5-8	O75690	187 aa		3.79	□□□□□ -1.8
IFT172-215	ENST00000494163	LUZP6	Q538Z0	58 aa		3.77	□□□□□ -1.81
IFT172-215	ENST00000494163	KRTAP4-2	Q9BYR5	136 aa		3.69	□□□□□ -1.82
IFT172-215	ENST00000494163	KRTAP5-1	Q6L8H4	278 aa		3.65	□□□□□ -1.83
IFT172-215	ENST00000494163	MUC5AC	P98088	5654 aa		3.63	□□□□□ -1.83
IFT172-215	ENST00000494163	LCE1E	Q5T753	118 aa		3.61	□□□□□ -1.83
IFT172-215	ENST00000494163	AHNAK	Q09666	5890 aa	Known RBP	3.57	□□□□□ -1.84
IFT172-215	ENST00000494163	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.54	□□□□□ -1.84
IFT172-215	ENST00000494163	LCE3D	Q9BYE3	92 aa		3.49	□□□□□ -1.85
IFT172-215	ENST00000494163	LCE1B	Q5T7P3	118 aa		3.37	□□□□□ -1.87
IFT172-215	ENST00000494163	LCE1C	Q5T751	118 aa		3.35	□□□□□ -1.87
IFT172-215	ENST00000494163	LCE3E	Q5T5B0	92 aa		3.34	□□□□□ -1.87
IFT172-215	ENST00000494163	NDUFAF8	A1L188	74 aa		3.27	□□□□□ -1.89
IFT172-215	ENST00000494163	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.08	□□□□□ -1.92
IFT172-215	ENST00000494163	KRTAP5-11	Q6L8G4	156 aa		3	□□□□□ -1.93
IFT172-215	ENST00000494163	LCE1F	Q5T754	118 aa		2.86	□□□□□ -1.95
IFT172-215	ENST00000494163	KRTAP21-2	Q3LI59	83 aa		2.85	□□□□□ -1.95
IFT172-215	ENST00000494163	INE1	O15225	51 aa		2.68	□□□□□ -1.98
IFT172-215	ENST00000494163	PRM1	P04553	51 aa		2.65	□□□□□ -1.99
IFT172-215	ENST00000494163	PHGR1	C9JFL3	82 aa		2.58	□□□□□ -2
IFT172-215	ENST00000494163	KRTAP4-4	Q9BYR3	166 aa		2.57	□□□□□ -2
IFT172-215	ENST00000494163	MUC19	Q7Z5P9	8384 aa		2.36	□□□□□ -2.03
IFT172-215	ENST00000494163	KRTAP21-1	Q3LI58	79 aa		1.83	□□□□□ -2.12
IFT172-215	ENST00000494163	MUC16	Q8WXI7	14507 aa		1.67	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 137.7 ms