RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 KRTAP19-3Q7Z4W3 81 aa1.23□□□□□ -2.21
SMC2-205ENST00000493955 A0A1B0GV90 55 aa1.22□□□□□ -2.21
SMC2-205ENST00000493955 NEBP20929 6669 aa1.22□□□□□ -2.21
SMC2-205ENST00000493955 LINC00643Q86TS7 51 aa1.22□□□□□ -2.21
SMC2-205ENST00000493955 LINC00472Q9H8W2 130 aa1.22□□□□□ -2.21
SMC2-205ENST00000493955 TP53AIP1Q9HCN2 124 aa1.22□□□□□ -2.21
SMC2-205ENST00000493955 HCG22E2RYF7 251 aa1.21□□□□□ -2.22
SMC2-205ENST00000493955 C20orf197Q8N268 126 aa1.21□□□□□ -2.22
SMC2-205ENST00000493955 ATOX1O00244 68 aa1.2□□□□□ -2.22
SMC2-205ENST00000493955 MT1BP07438 61 aa1.2□□□□□ -2.22
SMC2-205ENST00000493955 MRPL34Q9BQ48 92 aaKnown RBP1.2□□□□□ -2.22
SMC2-205ENST00000493955 LINC00846Q9NV44 126 aa1.2□□□□□ -2.22
SMC2-205ENST00000493955 K7EQZ3 153 aa1.19□□□□□ -2.22
SMC2-205ENST00000493955 WFDC13Q8IUB5 93 aa1.19□□□□□ -2.22
SMC2-205ENST00000493955 SPINK7P58062 85 aa1.18□□□□□ -2.22
SMC2-205ENST00000493955 MUC12Q9UKN1 5478 aa1.18□□□□□ -2.22
SMC2-205ENST00000493955 TRAV22A0A0B4J277 110 aa1.17□□□□□ -2.22
SMC2-205ENST00000493955 MMP24-AS1A0A0U1RRL7 71 aa1.17□□□□□ -2.22
SMC2-205ENST00000493955 KRTAP2-3P0C7H8 128 aa1.16□□□□□ -2.22
SMC2-205ENST00000493955 KRTAP2-4Q9BYR9 128 aa1.16□□□□□ -2.22
SMC2-205ENST00000493955 H0Y9P7 68 aa1.15□□□□□ -2.22
SMC2-205ENST00000493955 SPTSSBQ8NFR3 76 aa1.15□□□□□ -2.22
SMC2-205ENST00000493955 SPRR2EP22531 72 aa1.15□□□□□ -2.23
SMC2-205ENST00000493955 SPRR2BP35325 72 aa1.15□□□□□ -2.23
SMC2-205ENST00000493955 SPRR2AP35326 72 aa1.15□□□□□ -2.23
SMC2-205ENST00000493955 A0A087WVE0 104 aa1.14□□□□□ -2.23
SMC2-205ENST00000493955 CHKB-CPT1BH3BT56 60 aa1.14□□□□□ -2.23
SMC2-205ENST00000493955 NDUFC1O43677 76 aa1.14□□□□□ -2.23
SMC2-205ENST00000493955 KRTAP19-8Q3LI54 63 aa1.14□□□□□ -2.23
SMC2-205ENST00000493955 H1FX-AS1Q4G0G2 97 aa1.14□□□□□ -2.23
SMC2-205ENST00000493955 SPRR2FQ96RM1 72 aa1.14□□□□□ -2.23
SMC2-205ENST00000493955 KMT2DO14686 5537 aa1.13□□□□□ -2.23
SMC2-205ENST00000493955 MT-ATP8P03928 68 aa1.13□□□□□ -2.23
SMC2-205ENST00000493955 SERP2Q8N6R1 65 aa1.13□□□□□ -2.23
SMC2-205ENST00000493955 CYP4F30PQ9H0H9 118 aa1.13□□□□□ -2.23
SMC2-205ENST00000493955 Q5VV11 94 aa1.12□□□□□ -2.23
SMC2-205ENST00000493955 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
SMC2-205ENST00000493955 ACYP2P14621 99 aa1.11□□□□□ -2.23
SMC2-205ENST00000493955 SPRR2GQ9BYE4 73 aa1.11□□□□□ -2.23
SMC2-205ENST00000493955 S4R3F8 94 aa1.11□□□□□ -2.23
SMC2-205ENST00000493955 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
SMC2-205ENST00000493955 SPRR2DP22532 72 aa1.1□□□□□ -2.23
SMC2-205ENST00000493955 ATP5EP56381 51 aaPredicted RBP1.1□□□□□ -2.23
SMC2-205ENST00000493955 MT1XP80297 61 aa1.08□□□□□ -2.24
SMC2-205ENST00000493955 SERP1Q9Y6X1 66 aa1.08□□□□□ -2.24
SMC2-205ENST00000493955 KRTAP8-1Q8IUC2 63 aa1.07□□□□□ -2.24
SMC2-205ENST00000493955 PRR15LQ9BU68 103 aa1.07□□□□□ -2.24
SMC2-205ENST00000493955 CRIPTQ9P021 101 aa1.07□□□□□ -2.24
SMC2-205ENST00000493955 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
SMC2-205ENST00000493955 H0YAA0 97 aa1.06□□□□□ -2.24
SMC2-205ENST00000493955 A0A1B0GU69 56 aa1.04□□□□□ -2.24
SMC2-205ENST00000493955 M0QZ58 72 aa1.04□□□□□ -2.24
SMC2-205ENST00000493955 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
SMC2-205ENST00000493955 H7BZZ5 65 aa1.03□□□□□ -2.24
SMC2-205ENST00000493955 GPR98Q8WXG9 6306 aa1.02□□□□□ -2.25
SMC2-205ENST00000493955 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
SMC2-205ENST00000493955 UQCR11O14957 56 aa0.99□□□□□ -2.25
SMC2-205ENST00000493955 MT4P47944 62 aa0.99□□□□□ -2.25
SMC2-205ENST00000493955 DSTQ03001 7570 aaKnown RBP0.99□□□□□ -2.25
SMC2-205ENST00000493955 KRTAP19-7Q3SYF9 63 aa0.98□□□□□ -2.25
SMC2-205ENST00000493955 LINC01558Q9Y6Z2 57 aa0.98□□□□□ -2.25
SMC2-205ENST00000493955 MT1EP04732 61 aa0.96□□□□□ -2.26
SMC2-205ENST00000493955 TNP1P09430 55 aa0.93□□□□□ -2.26
SMC2-205ENST00000493955 MT1MQ8N339 61 aa0.93□□□□□ -2.26
SMC2-205ENST00000493955 KRTAP19-5Q3LI72 72 aa0.9□□□□□ -2.26
SMC2-205ENST00000493955 MT1GP13640 62 aa0.89□□□□□ -2.27
SMC2-205ENST00000493955 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
SMC2-205ENST00000493955 MT1LQ93083 61 aa0.89□□□□□ -2.27
SMC2-205ENST00000493955 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
SMC2-205ENST00000493955 SYNE1Q8NF91 8797 aaKnown RBP0.81□□□□□ -2.28
SMC2-205ENST00000493955 MUC5BQ9HC84 5762 aaPredicted RBP0.8□□□□□ -2.28
SMC2-205ENST00000493955 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
SMC2-205ENST00000493955 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
SMC2-205ENST00000493955 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
SMC2-205ENST00000493955 MT1AP04731 61 aa0.75□□□□□ -2.29
SMC2-205ENST00000493955 KRTAP6-2Q3LI66 62 aa0.75□□□□□ -2.29
SMC2-205ENST00000493955 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
SMC2-205ENST00000493955 PRM1P04553 51 aa0.43□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 106.5 ms