RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
SEMA3F-209ENST00000493743 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
SEMA3F-209ENST00000493743 KRTAP2-1Q9BYU5 128 aa3.26□□□□□ -1.89
SEMA3F-209ENST00000493743 A0A0D9SG42 100 aa3.25□□□□□ -1.89
SEMA3F-209ENST00000493743 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
SEMA3F-209ENST00000493743 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
SEMA3F-209ENST00000493743 SPRR2DP22532 72 aa3.22□□□□□ -1.89
SEMA3F-209ENST00000493743 KRTAP4-8A0A0G2JLE6 195 aa3.18□□□□□ -1.9
SEMA3F-209ENST00000493743 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
SEMA3F-209ENST00000493743 KRTAP4-8Q9BYQ9 185 aa3.18□□□□□ -1.9
SEMA3F-209ENST00000493743 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
SEMA3F-209ENST00000493743 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
SEMA3F-209ENST00000493743 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
SEMA3F-209ENST00000493743 TNP1P09430 55 aa3.04□□□□□ -1.92
SEMA3F-209ENST00000493743 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
SEMA3F-209ENST00000493743 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
SEMA3F-209ENST00000493743 KRTAP19-4Q3LI73 84 aa3□□□□□ -1.93
SEMA3F-209ENST00000493743 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
SEMA3F-209ENST00000493743 KRTAP4-9Q9BYQ8 210 aa2.95□□□□□ -1.94
SEMA3F-209ENST00000493743 KRTAP19-7Q3SYF9 63 aa2.93□□□□□ -1.94
SEMA3F-209ENST00000493743 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
SEMA3F-209ENST00000493743 MT1EP04732 61 aa2.91□□□□□ -1.94
SEMA3F-209ENST00000493743 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
SEMA3F-209ENST00000493743 MT1GP13640 62 aa2.85□□□□□ -1.95
SEMA3F-209ENST00000493743 LCE4AQ5TA78 99 aa2.84□□□□□ -1.95
SEMA3F-209ENST00000493743 MT4P47944 62 aa2.82□□□□□ -1.96
SEMA3F-209ENST00000493743 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
SEMA3F-209ENST00000493743 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
SEMA3F-209ENST00000493743 MT1MQ8N339 61 aa2.79□□□□□ -1.96
SEMA3F-209ENST00000493743 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
SEMA3F-209ENST00000493743 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
SEMA3F-209ENST00000493743 MT3P25713 68 aa2.76□□□□□ -1.97
SEMA3F-209ENST00000493743 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
SEMA3F-209ENST00000493743 MT1LQ93083 61 aa2.76□□□□□ -1.97
SEMA3F-209ENST00000493743 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
SEMA3F-209ENST00000493743 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
SEMA3F-209ENST00000493743 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
SEMA3F-209ENST00000493743 KRTAP4-6Q9BYQ5 205 aa2.71□□□□□ -1.98
SEMA3F-209ENST00000493743 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
SEMA3F-209ENST00000493743 KRTAP5-3Q6L8H2 238 aa2.65□□□□□ -1.99
SEMA3F-209ENST00000493743 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
SEMA3F-209ENST00000493743 KRTAP4-7Q9BYR0 210 aa2.61□□□□□ -1.99
SEMA3F-209ENST00000493743 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
SEMA3F-209ENST00000493743 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
SEMA3F-209ENST00000493743 KRTAP12-4P60329 112 aa2.55□□□□□ -2
SEMA3F-209ENST00000493743 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
SEMA3F-209ENST00000493743 LOC100996750A0A140TA64 210 aa2.48□□□□□ -2.01
SEMA3F-209ENST00000493743 KRTAP9-4Q9BYQ2 154 aa2.42□□□□□ -2.02
SEMA3F-209ENST00000493743 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
SEMA3F-209ENST00000493743 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
SEMA3F-209ENST00000493743 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
SEMA3F-209ENST00000493743 KRTAP9-6A8MVA2 160 aa2.36□□□□□ -2.03
SEMA3F-209ENST00000493743 MT1AP04731 61 aa2.35□□□□□ -2.03
SEMA3F-209ENST00000493743 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
SEMA3F-209ENST00000493743 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.03
SEMA3F-209ENST00000493743 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
SEMA3F-209ENST00000493743 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
SEMA3F-209ENST00000493743 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
SEMA3F-209ENST00000493743 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
SEMA3F-209ENST00000493743 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
SEMA3F-209ENST00000493743 KRTAP6-2Q3LI66 62 aa2.27□□□□□ -2.05
SEMA3F-209ENST00000493743 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
SEMA3F-209ENST00000493743 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
SEMA3F-209ENST00000493743 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
SEMA3F-209ENST00000493743 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
SEMA3F-209ENST00000493743 PRM1P04553 51 aa1.96□□□□□ -2.1
SEMA3F-209ENST00000493743 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
SEMA3F-209ENST00000493743 KRTAP4-2Q9BYR5 136 aa1.92□□□□□ -2.1
SEMA3F-209ENST00000493743 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
SEMA3F-209ENST00000493743 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
SEMA3F-209ENST00000493743 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
SEMA3F-209ENST00000493743 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
SEMA3F-209ENST00000493743 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
SEMA3F-209ENST00000493743 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
SEMA3F-209ENST00000493743 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
SEMA3F-209ENST00000493743 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
SEMA3F-209ENST00000493743 KRTAP4-4Q9BYR3 166 aa1.43□□□□□ -2.18
SEMA3F-209ENST00000493743 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 46.7 ms