RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 MDN1Q9NU22 5596 aa5.07□□□□□ -1.6
SNX17-208ENST00000493711 KRTAP5-11Q6L8G4 156 aa5.03□□□□□ -1.6
SNX17-208ENST00000493711 KMT2DO14686 5537 aa5.03□□□□□ -1.6
SNX17-208ENST00000493711 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
SNX17-208ENST00000493711 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
SNX17-208ENST00000493711 BRK1Q8WUW1 75 aa4.97□□□□□ -1.61
SNX17-208ENST00000493711 KRTAP5-9P26371 169 aa4.95□□□□□ -1.62
SNX17-208ENST00000493711 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
SNX17-208ENST00000493711 C10orf95Q9H7T3 257 aa4.95□□□□□ -1.62
SNX17-208ENST00000493711 TNP1P09430 55 aa4.94□□□□□ -1.62
SNX17-208ENST00000493711 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.91□□□□□ -1.62
SNX17-208ENST00000493711 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
SNX17-208ENST00000493711 ROMO1P60602 79 aa4.86□□□□□ -1.63
SNX17-208ENST00000493711 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
SNX17-208ENST00000493711 KRTAP2-1Q9BYU5 128 aa4.81□□□□□ -1.64
SNX17-208ENST00000493711 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
SNX17-208ENST00000493711 GPR98Q8WXG9 6306 aa4.77□□□□□ -1.65
SNX17-208ENST00000493711 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
SNX17-208ENST00000493711 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
SNX17-208ENST00000493711 MT3P25713 68 aa4.74□□□□□ -1.65
SNX17-208ENST00000493711 SPRR2EP22531 72 aa4.73□□□□□ -1.65
SNX17-208ENST00000493711 SPRR2BP35325 72 aa4.73□□□□□ -1.65
SNX17-208ENST00000493711 SPRR2AP35326 72 aa4.73□□□□□ -1.65
SNX17-208ENST00000493711 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
SNX17-208ENST00000493711 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
SNX17-208ENST00000493711 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
SNX17-208ENST00000493711 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
SNX17-208ENST00000493711 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
SNX17-208ENST00000493711 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
SNX17-208ENST00000493711 SPRR2DP22532 72 aa4.58□□□□□ -1.68
SNX17-208ENST00000493711 MT1EP04732 61 aa4.57□□□□□ -1.68
SNX17-208ENST00000493711 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
SNX17-208ENST00000493711 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
SNX17-208ENST00000493711 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
SNX17-208ENST00000493711 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
SNX17-208ENST00000493711 MT1GP13640 62 aa4.44□□□□□ -1.7
SNX17-208ENST00000493711 MT1LQ93083 61 aa4.44□□□□□ -1.7
SNX17-208ENST00000493711 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
SNX17-208ENST00000493711 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
SNX17-208ENST00000493711 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
SNX17-208ENST00000493711 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
SNX17-208ENST00000493711 MT1MQ8N339 61 aa4.32□□□□□ -1.72
SNX17-208ENST00000493711 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
SNX17-208ENST00000493711 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
SNX17-208ENST00000493711 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
SNX17-208ENST00000493711 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.75
SNX17-208ENST00000493711 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
SNX17-208ENST00000493711 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
SNX17-208ENST00000493711 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
SNX17-208ENST00000493711 MT4P47944 62 aa4.05□□□□□ -1.76
SNX17-208ENST00000493711 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
SNX17-208ENST00000493711 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
SNX17-208ENST00000493711 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
SNX17-208ENST00000493711 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
SNX17-208ENST00000493711 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
SNX17-208ENST00000493711 MT1AP04731 61 aa3.8□□□□□ -1.8
SNX17-208ENST00000493711 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
SNX17-208ENST00000493711 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
SNX17-208ENST00000493711 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
SNX17-208ENST00000493711 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
SNX17-208ENST00000493711 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
SNX17-208ENST00000493711 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
SNX17-208ENST00000493711 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
SNX17-208ENST00000493711 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
SNX17-208ENST00000493711 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
SNX17-208ENST00000493711 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
SNX17-208ENST00000493711 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
SNX17-208ENST00000493711 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
SNX17-208ENST00000493711 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
SNX17-208ENST00000493711 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
SNX17-208ENST00000493711 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
SNX17-208ENST00000493711 INE1O15225 51 aa2.84□□□□□ -1.95
SNX17-208ENST00000493711 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
SNX17-208ENST00000493711 PRM1P04553 51 aa2.47□□□□□ -2.01
SNX17-208ENST00000493711 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
SNX17-208ENST00000493711 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
SNX17-208ENST00000493711 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SNX17-208ENST00000493711 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 186.3 ms