RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
LSM2-214ENST00000493387 KRTAP25-1Q3LHN0 102 aa4.48□□□□□ -1.69
LSM2-214ENST00000493387 ROMO1P60602 79 aa4.46□□□□□ -1.7
LSM2-214ENST00000493387 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
LSM2-214ENST00000493387 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
LSM2-214ENST00000493387 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
LSM2-214ENST00000493387 NEBP20929 6669 aa4.38□□□□□ -1.71
LSM2-214ENST00000493387 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
LSM2-214ENST00000493387 KMT2DO14686 5537 aa4.36□□□□□ -1.71
LSM2-214ENST00000493387 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
LSM2-214ENST00000493387 MUC12Q9UKN1 5478 aa4.33□□□□□ -1.72
LSM2-214ENST00000493387 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
LSM2-214ENST00000493387 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
LSM2-214ENST00000493387 PP632Q6XCG6 107 aa4.28□□□□□ -1.72
LSM2-214ENST00000493387 MT1EP04732 61 aa4.26□□□□□ -1.73
LSM2-214ENST00000493387 SPRR2EP22531 72 aa4.25□□□□□ -1.73
LSM2-214ENST00000493387 SPRR2BP35325 72 aa4.25□□□□□ -1.73
LSM2-214ENST00000493387 SPRR2AP35326 72 aa4.25□□□□□ -1.73
LSM2-214ENST00000493387 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
LSM2-214ENST00000493387 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
LSM2-214ENST00000493387 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
LSM2-214ENST00000493387 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
LSM2-214ENST00000493387 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
LSM2-214ENST00000493387 MDN1Q9NU22 5596 aa4.16□□□□□ -1.74
LSM2-214ENST00000493387 MT1GP13640 62 aa4.13□□□□□ -1.75
LSM2-214ENST00000493387 MT1LQ93083 61 aa4.13□□□□□ -1.75
LSM2-214ENST00000493387 SPRR2DP22532 72 aa4.1□□□□□ -1.75
LSM2-214ENST00000493387 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
LSM2-214ENST00000493387 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
LSM2-214ENST00000493387 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
LSM2-214ENST00000493387 MT1MQ8N339 61 aa4.02□□□□□ -1.77
LSM2-214ENST00000493387 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
LSM2-214ENST00000493387 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
LSM2-214ENST00000493387 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
LSM2-214ENST00000493387 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
LSM2-214ENST00000493387 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
LSM2-214ENST00000493387 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
LSM2-214ENST00000493387 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
LSM2-214ENST00000493387 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
LSM2-214ENST00000493387 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
LSM2-214ENST00000493387 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
LSM2-214ENST00000493387 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
LSM2-214ENST00000493387 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
LSM2-214ENST00000493387 SPRR5A0A1B0GTR4 108 aa3.61□□□□□ -1.83
LSM2-214ENST00000493387 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
LSM2-214ENST00000493387 MT4P47944 62 aa3.54□□□□□ -1.84
LSM2-214ENST00000493387 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
LSM2-214ENST00000493387 MT1AP04731 61 aa3.53□□□□□ -1.84
LSM2-214ENST00000493387 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
LSM2-214ENST00000493387 MT3P25713 68 aa3.48□□□□□ -1.85
LSM2-214ENST00000493387 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
LSM2-214ENST00000493387 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
LSM2-214ENST00000493387 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
LSM2-214ENST00000493387 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
LSM2-214ENST00000493387 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
LSM2-214ENST00000493387 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
LSM2-214ENST00000493387 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
LSM2-214ENST00000493387 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
LSM2-214ENST00000493387 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
LSM2-214ENST00000493387 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
LSM2-214ENST00000493387 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
LSM2-214ENST00000493387 INE1O15225 51 aa2.98□□□□□ -1.93
LSM2-214ENST00000493387 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
LSM2-214ENST00000493387 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
LSM2-214ENST00000493387 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
LSM2-214ENST00000493387 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
LSM2-214ENST00000493387 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
LSM2-214ENST00000493387 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
LSM2-214ENST00000493387 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
LSM2-214ENST00000493387 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
LSM2-214ENST00000493387 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
LSM2-214ENST00000493387 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
LSM2-214ENST00000493387 PRM1P04553 51 aa2.27□□□□□ -2.05
LSM2-214ENST00000493387 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
LSM2-214ENST00000493387 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
LSM2-214ENST00000493387 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
LSM2-214ENST00000493387 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
LSM2-214ENST00000493387 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 85.7 ms