RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 SPRR2DP22532 72 aa3.39□□□□□ -1.87
TM4SF1-203ENST00000493298 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
TM4SF1-203ENST00000493298 KRTAP2-1Q9BYU5 128 aa3.39□□□□□ -1.87
TM4SF1-203ENST00000493298 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
TM4SF1-203ENST00000493298 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
TM4SF1-203ENST00000493298 KRTAP23-1A1A580 65 aa3.33□□□□□ -1.88
TM4SF1-203ENST00000493298 MT1EP04732 61 aa3.33□□□□□ -1.88
TM4SF1-203ENST00000493298 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
TM4SF1-203ENST00000493298 LCE5AQ5TCM9 118 aa3.33□□□□□ -1.88
TM4SF1-203ENST00000493298 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
TM4SF1-203ENST00000493298 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
TM4SF1-203ENST00000493298 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
TM4SF1-203ENST00000493298 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
TM4SF1-203ENST00000493298 MT1LQ93083 61 aa3.24□□□□□ -1.89
TM4SF1-203ENST00000493298 PP632Q6XCG6 107 aa3.21□□□□□ -1.9
TM4SF1-203ENST00000493298 KRTAP4-7Q9BYR0 210 aa3.19□□□□□ -1.9
TM4SF1-203ENST00000493298 MT1GP13640 62 aa3.16□□□□□ -1.9
TM4SF1-203ENST00000493298 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
TM4SF1-203ENST00000493298 MT1MQ8N339 61 aa3.15□□□□□ -1.91
TM4SF1-203ENST00000493298 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.91
TM4SF1-203ENST00000493298 KRTAP4-9Q9BYQ8 210 aa3.13□□□□□ -1.91
TM4SF1-203ENST00000493298 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
TM4SF1-203ENST00000493298 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
TM4SF1-203ENST00000493298 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
TM4SF1-203ENST00000493298 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
TM4SF1-203ENST00000493298 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
TM4SF1-203ENST00000493298 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
TM4SF1-203ENST00000493298 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
TM4SF1-203ENST00000493298 LOC100996750A0A140TA64 210 aa2.99□□□□□ -1.93
TM4SF1-203ENST00000493298 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
TM4SF1-203ENST00000493298 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
TM4SF1-203ENST00000493298 KRTAP4-6Q9BYQ5 205 aa2.98□□□□□ -1.93
TM4SF1-203ENST00000493298 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
TM4SF1-203ENST00000493298 MT4P47944 62 aa2.97□□□□□ -1.93
TM4SF1-203ENST00000493298 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
TM4SF1-203ENST00000493298 SVIPQ8NHG7 77 aa2.96□□□□□ -1.94
TM4SF1-203ENST00000493298 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
TM4SF1-203ENST00000493298 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
TM4SF1-203ENST00000493298 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
TM4SF1-203ENST00000493298 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
TM4SF1-203ENST00000493298 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
TM4SF1-203ENST00000493298 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
TM4SF1-203ENST00000493298 MT1AP04731 61 aa2.73□□□□□ -1.97
TM4SF1-203ENST00000493298 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
TM4SF1-203ENST00000493298 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
TM4SF1-203ENST00000493298 KRTAP9-4Q9BYQ2 154 aa2.61□□□□□ -1.99
TM4SF1-203ENST00000493298 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
TM4SF1-203ENST00000493298 KRTAP5-8O75690 187 aa2.56□□□□□ -2
TM4SF1-203ENST00000493298 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
TM4SF1-203ENST00000493298 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
TM4SF1-203ENST00000493298 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
TM4SF1-203ENST00000493298 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
TM4SF1-203ENST00000493298 MUC5ACP98088 5654 aa2.46□□□□□ -2.01
TM4SF1-203ENST00000493298 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
TM4SF1-203ENST00000493298 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
TM4SF1-203ENST00000493298 MT3P25713 68 aa2.42□□□□□ -2.02
TM4SF1-203ENST00000493298 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.02
TM4SF1-203ENST00000493298 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
TM4SF1-203ENST00000493298 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
TM4SF1-203ENST00000493298 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
TM4SF1-203ENST00000493298 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
TM4SF1-203ENST00000493298 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
TM4SF1-203ENST00000493298 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
TM4SF1-203ENST00000493298 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
TM4SF1-203ENST00000493298 A0A0A0MQY5 61 aa1.99□□□□□ -2.09
TM4SF1-203ENST00000493298 INE1O15225 51 aa1.98□□□□□ -2.09
TM4SF1-203ENST00000493298 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
TM4SF1-203ENST00000493298 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
TM4SF1-203ENST00000493298 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
TM4SF1-203ENST00000493298 H3BS24 57 aa1.89□□□□□ -2.11
TM4SF1-203ENST00000493298 PRM1P04553 51 aa1.84□□□□□ -2.11
TM4SF1-203ENST00000493298 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
TM4SF1-203ENST00000493298 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
TM4SF1-203ENST00000493298 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
TM4SF1-203ENST00000493298 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
TM4SF1-203ENST00000493298 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
TM4SF1-203ENST00000493298 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
TM4SF1-203ENST00000493298 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms