RNA–Protein interactions for RNA: ENST00000492719.5

GAPDH-209, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 3

Gene GAPDH, Length 930 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-209ENST00000492719 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
GAPDH-209ENST00000492719 H3BS24 57 aa4.92□□□□□ -1.62
GAPDH-209ENST00000492719 COA5Q86WW8 74 aa4.92□□□□□ -1.62
GAPDH-209ENST00000492719 SMIM26A0A096LP01 95 aa4.91□□□□□ -1.62
GAPDH-209ENST00000492719 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
GAPDH-209ENST00000492719 MT1GP13640 62 aa4.87□□□□□ -1.63
GAPDH-209ENST00000492719 A0A0D9SG42 100 aa4.86□□□□□ -1.63
GAPDH-209ENST00000492719 SEC61GP60059 68 aa4.86□□□□□ -1.63
GAPDH-209ENST00000492719 SPATA8Q6RVD6 105 aa4.86□□□□□ -1.63
GAPDH-209ENST00000492719 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
GAPDH-209ENST00000492719 A0A1B0GU33 70 aa4.84□□□□□ -1.63
GAPDH-209ENST00000492719 KRTAP12-1P59990 96 aa4.84□□□□□ -1.63
GAPDH-209ENST00000492719 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
GAPDH-209ENST00000492719 SPINT4Q6UDR6 99 aa4.81□□□□□ -1.64
GAPDH-209ENST00000492719 MUC5BQ9HC84 5762 aaPredicted RBP4.8□□□□□ -1.64
GAPDH-209ENST00000492719 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
GAPDH-209ENST00000492719 Q1T7F1 81 aa4.76□□□□□ -1.65
GAPDH-209ENST00000492719 MT1MQ8N339 61 aa4.75□□□□□ -1.65
GAPDH-209ENST00000492719 MT1LQ93083 61 aa4.75□□□□□ -1.65
GAPDH-209ENST00000492719 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
GAPDH-209ENST00000492719 V9GYY9 64 aa4.74□□□□□ -1.65
GAPDH-209ENST00000492719 PSPHP1O15172 72 aa4.68□□□□□ -1.66
GAPDH-209ENST00000492719 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
GAPDH-209ENST00000492719 PRR15LQ9BU68 103 aa4.66□□□□□ -1.66
GAPDH-209ENST00000492719 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
GAPDH-209ENST00000492719 A0A1B0GU69 56 aa4.65□□□□□ -1.67
GAPDH-209ENST00000492719 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
GAPDH-209ENST00000492719 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.67
GAPDH-209ENST00000492719 A8MU10 97 aa4.64□□□□□ -1.67
GAPDH-209ENST00000492719 TNP1P09430 55 aa4.62□□□□□ -1.67
GAPDH-209ENST00000492719 BRK1Q8WUW1 75 aa4.6□□□□□ -1.67
GAPDH-209ENST00000492719 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
GAPDH-209ENST00000492719 A6NED7 52 aa4.54□□□□□ -1.68
GAPDH-209ENST00000492719 SVIPQ8NHG7 77 aa4.52□□□□□ -1.69
GAPDH-209ENST00000492719 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
GAPDH-209ENST00000492719 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
GAPDH-209ENST00000492719 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
GAPDH-209ENST00000492719 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
GAPDH-209ENST00000492719 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
GAPDH-209ENST00000492719 UQCR11O14957 56 aa4.42□□□□□ -1.7
GAPDH-209ENST00000492719 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
GAPDH-209ENST00000492719 MIR22HGQ0VDD5 57 aa4.4□□□□□ -1.71
GAPDH-209ENST00000492719 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
GAPDH-209ENST00000492719 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
GAPDH-209ENST00000492719 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
GAPDH-209ENST00000492719 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
GAPDH-209ENST00000492719 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
GAPDH-209ENST00000492719 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
GAPDH-209ENST00000492719 K7ERS5 55 aa4.18□□□□□ -1.74
GAPDH-209ENST00000492719 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
GAPDH-209ENST00000492719 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
GAPDH-209ENST00000492719 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
GAPDH-209ENST00000492719 MT1AP04731 61 aa4.04□□□□□ -1.76
GAPDH-209ENST00000492719 ROMO1P60602 79 aa4.03□□□□□ -1.76
GAPDH-209ENST00000492719 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
GAPDH-209ENST00000492719 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
GAPDH-209ENST00000492719 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
GAPDH-209ENST00000492719 KRTAP6-2Q3LI66 62 aa3.85□□□□□ -1.79
GAPDH-209ENST00000492719 MT3P25713 68 aa3.7□□□□□ -1.82
GAPDH-209ENST00000492719 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
GAPDH-209ENST00000492719 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
GAPDH-209ENST00000492719 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
GAPDH-209ENST00000492719 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
GAPDH-209ENST00000492719 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
GAPDH-209ENST00000492719 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
GAPDH-209ENST00000492719 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
GAPDH-209ENST00000492719 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
GAPDH-209ENST00000492719 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
GAPDH-209ENST00000492719 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
GAPDH-209ENST00000492719 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
GAPDH-209ENST00000492719 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
GAPDH-209ENST00000492719 INE1O15225 51 aa2.74□□□□□ -1.97
GAPDH-209ENST00000492719 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
GAPDH-209ENST00000492719 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
GAPDH-209ENST00000492719 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
GAPDH-209ENST00000492719 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
GAPDH-209ENST00000492719 PRM1P04553 51 aa2.12□□□□□ -2.07
GAPDH-209ENST00000492719 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms