RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 IGLV5-48A0A075B6I7 105 aa1.21□□□□□ -2.22
SNX13-209ENST00000492626 HTN1P15515 57 aa1.21□□□□□ -2.22
SNX13-209ENST00000492626 KRTAP4-1Q9BYQ7 146 aa1.21□□□□□ -2.22
SNX13-209ENST00000492626 SPINK1P00995 79 aa1.21□□□□□ -2.22
SNX13-209ENST00000492626 WFDC10BQ8IUB3 73 aa1.21□□□□□ -2.22
SNX13-209ENST00000492626 CLPSL2Q6UWE3 100 aa1.2□□□□□ -2.22
SNX13-209ENST00000492626 OBSCNQ5VST9 7968 aa1.2□□□□□ -2.22
SNX13-209ENST00000492626 H0YAA0 97 aa1.2□□□□□ -2.22
SNX13-209ENST00000492626 Q8IZM0 81 aa1.19□□□□□ -2.22
SNX13-209ENST00000492626 Q96NJ1 140 aa1.19□□□□□ -2.22
SNX13-209ENST00000492626 NDUFB1O75438 58 aa1.19□□□□□ -2.22
SNX13-209ENST00000492626 MACF1Q9UPN3 7388 aaKnown RBP1.19□□□□□ -2.22
SNX13-209ENST00000492626 KRTAP4-4Q9BYR3 166 aa1.19□□□□□ -2.22
SNX13-209ENST00000492626 C10orf95Q9H7T3 257 aa1.19□□□□□ -2.22
SNX13-209ENST00000492626 GVQW2A0A096LPI5 108 aaPredicted RBP1.18□□□□□ -2.22
SNX13-209ENST00000492626 DEFB105AQ8NG35 78 aa1.18□□□□□ -2.22
SNX13-209ENST00000492626 MMP24-AS1A0A0U1RRL7 71 aa1.18□□□□□ -2.22
SNX13-209ENST00000492626 TRGV1A0A0A0MS02 117 aa1.18□□□□□ -2.22
SNX13-209ENST00000492626 DEFB130BP0DP73 79 aa1.18□□□□□ -2.22
SNX13-209ENST00000492626 DEFB130AP0DP74 79 aa1.18□□□□□ -2.22
SNX13-209ENST00000492626 Q6ZRX8 168 aa1.18□□□□□ -2.22
SNX13-209ENST00000492626 C6orf48Q9UBA6 75 aa1.17□□□□□ -2.22
SNX13-209ENST00000492626 RPL37P61927 97 aaKnown RBP1.16□□□□□ -2.22
SNX13-209ENST00000492626 NOP10Q9NPE3 64 aaKnown RBP1.16□□□□□ -2.22
SNX13-209ENST00000492626 COX17Q14061 63 aa1.15□□□□□ -2.22
SNX13-209ENST00000492626 MT1FP04733 61 aa1.15□□□□□ -2.23
SNX13-209ENST00000492626 KRTAP5-5Q701N2 237 aaPredicted RBP1.15□□□□□ -2.23
SNX13-209ENST00000492626 A0A1B0GU69 56 aa1.14□□□□□ -2.23
SNX13-209ENST00000492626 KRTAP12-4P60329 112 aa1.14□□□□□ -2.23
SNX13-209ENST00000492626 KRTAP19-8Q3LI54 63 aa1.14□□□□□ -2.23
SNX13-209ENST00000492626 UQCR11O14957 56 aa1.14□□□□□ -2.23
SNX13-209ENST00000492626 SSBP3-AS1Q7Z2R9 100 aa1.14□□□□□ -2.23
SNX13-209ENST00000492626 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
SNX13-209ENST00000492626 SPRR1AP35321 89 aa1.13□□□□□ -2.23
SNX13-209ENST00000492626 MDN1Q9NU22 5596 aa1.12□□□□□ -2.23
SNX13-209ENST00000492626 SPRR2FQ96RM1 72 aa1.12□□□□□ -2.23
SNX13-209ENST00000492626 LCE1CQ5T751 118 aa1.1□□□□□ -2.23
SNX13-209ENST00000492626 LCE1BQ5T7P3 118 aa1.1□□□□□ -2.23
SNX13-209ENST00000492626 KRTAP5-1Q6L8H4 278 aa1.1□□□□□ -2.23
SNX13-209ENST00000492626 PRLHP81277 87 aa1.09□□□□□ -2.24
SNX13-209ENST00000492626 ACYP2P14621 99 aa1.08□□□□□ -2.24
SNX13-209ENST00000492626 A0A096LNI7 61 aa1.08□□□□□ -2.24
SNX13-209ENST00000492626 KRTAP8-1Q8IUC2 63 aa1.08□□□□□ -2.24
SNX13-209ENST00000492626 MRPL34Q9BQ48 92 aaKnown RBP1.06□□□□□ -2.24
SNX13-209ENST00000492626 TP53AIP1Q9HCN2 124 aa1.06□□□□□ -2.24
SNX13-209ENST00000492626 H1FX-AS1Q4G0G2 97 aa1.06□□□□□ -2.24
SNX13-209ENST00000492626 SPRR1BP22528 89 aa1.04□□□□□ -2.24
SNX13-209ENST00000492626 SPRR2GQ9BYE4 73 aa1.03□□□□□ -2.24
SNX13-209ENST00000492626 PLAC4Q8WY50 150 aa1.03□□□□□ -2.25
SNX13-209ENST00000492626 MT1BP07438 61 aa1.01□□□□□ -2.25
SNX13-209ENST00000492626 A0A0D9SG42 100 aa1.01□□□□□ -2.25
SNX13-209ENST00000492626 KRTAP20-2Q3LI61 65 aa1□□□□□ -2.25
SNX13-209ENST00000492626 KRTAP4-3Q9BYR4 195 aa1□□□□□ -2.25
SNX13-209ENST00000492626 S4R3F8 94 aa0.99□□□□□ -2.25
SNX13-209ENST00000492626 MUC12Q9UKN1 5478 aa0.98□□□□□ -2.25
SNX13-209ENST00000492626 MUC19Q7Z5P9 8384 aa0.97□□□□□ -2.25
SNX13-209ENST00000492626 MT1GP13640 62 aa0.94□□□□□ -2.26
SNX13-209ENST00000492626 MT4P47944 62 aa0.94□□□□□ -2.26
SNX13-209ENST00000492626 KRTAP19-3Q7Z4W3 81 aa0.93□□□□□ -2.26
SNX13-209ENST00000492626 C9orf92A6NGG3 77 aa0.86□□□□□ -2.27
SNX13-209ENST00000492626 MT1MQ8N339 61 aa0.86□□□□□ -2.27
SNX13-209ENST00000492626 MT1XP80297 61 aa0.83□□□□□ -2.28
SNX13-209ENST00000492626 MT1EP04732 61 aa0.82□□□□□ -2.28
SNX13-209ENST00000492626 M0QZ58 72 aa0.79□□□□□ -2.28
SNX13-209ENST00000492626 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.29
SNX13-209ENST00000492626 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
SNX13-209ENST00000492626 KRTAP19-7Q3SYF9 63 aa0.74□□□□□ -2.29
SNX13-209ENST00000492626 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
SNX13-209ENST00000492626 MT1AP04731 61 aa0.71□□□□□ -2.3
SNX13-209ENST00000492626 TNP1P09430 55 aa0.7□□□□□ -2.3
SNX13-209ENST00000492626 MT1LQ93083 61 aa0.7□□□□□ -2.3
SNX13-209ENST00000492626 KRTAP19-5Q3LI72 72 aa0.68□□□□□ -2.3
SNX13-209ENST00000492626 DSTQ03001 7570 aaKnown RBP0.66□□□□□ -2.3
SNX13-209ENST00000492626 PRM1P04553 51 aa0.65□□□□□ -2.31
SNX13-209ENST00000492626 SYNE1Q8NF91 8797 aaKnown RBP0.65□□□□□ -2.31
SNX13-209ENST00000492626 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
SNX13-209ENST00000492626 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
SNX13-209ENST00000492626 KRTAP6-1Q3LI64 71 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 36.6 ms