RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
SEC61A1-206ENST00000491668 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
SEC61A1-206ENST00000491668 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
SEC61A1-206ENST00000491668 K7ERS5 55 aa5.08□□□□□ -1.6
SEC61A1-206ENST00000491668 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
SEC61A1-206ENST00000491668 SPRR2DP22532 72 aa4.97□□□□□ -1.61
SEC61A1-206ENST00000491668 CDC42SE1Q9NRR8 79 aa4.97□□□□□ -1.61
SEC61A1-206ENST00000491668 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
SEC61A1-206ENST00000491668 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
SEC61A1-206ENST00000491668 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
SEC61A1-206ENST00000491668 TNP1P09430 55 aa4.87□□□□□ -1.63
SEC61A1-206ENST00000491668 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
SEC61A1-206ENST00000491668 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
SEC61A1-206ENST00000491668 KRTAP19-7Q3SYF9 63 aa4.8□□□□□ -1.64
SEC61A1-206ENST00000491668 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
SEC61A1-206ENST00000491668 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
SEC61A1-206ENST00000491668 MT1EP04732 61 aa4.74□□□□□ -1.65
SEC61A1-206ENST00000491668 ROMO1P60602 79 aa4.74□□□□□ -1.65
SEC61A1-206ENST00000491668 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
SEC61A1-206ENST00000491668 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
SEC61A1-206ENST00000491668 GPR98Q8WXG9 6306 aa4.66□□□□□ -1.66
SEC61A1-206ENST00000491668 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
SEC61A1-206ENST00000491668 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
SEC61A1-206ENST00000491668 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
SEC61A1-206ENST00000491668 MT1GP13640 62 aa4.56□□□□□ -1.68
SEC61A1-206ENST00000491668 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
SEC61A1-206ENST00000491668 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
SEC61A1-206ENST00000491668 MT1MQ8N339 61 aa4.52□□□□□ -1.69
SEC61A1-206ENST00000491668 MT1LQ93083 61 aa4.52□□□□□ -1.69
SEC61A1-206ENST00000491668 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
SEC61A1-206ENST00000491668 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
SEC61A1-206ENST00000491668 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
SEC61A1-206ENST00000491668 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
SEC61A1-206ENST00000491668 MT4P47944 62 aa4.37□□□□□ -1.71
SEC61A1-206ENST00000491668 KRTAP5-4Q6L8H1 288 aa4.36□□□□□ -1.71
SEC61A1-206ENST00000491668 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
SEC61A1-206ENST00000491668 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
SEC61A1-206ENST00000491668 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
SEC61A1-206ENST00000491668 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
SEC61A1-206ENST00000491668 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
SEC61A1-206ENST00000491668 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
SEC61A1-206ENST00000491668 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
SEC61A1-206ENST00000491668 SVIPQ8NHG7 77 aa4.09□□□□□ -1.75
SEC61A1-206ENST00000491668 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
SEC61A1-206ENST00000491668 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
SEC61A1-206ENST00000491668 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
SEC61A1-206ENST00000491668 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
SEC61A1-206ENST00000491668 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
SEC61A1-206ENST00000491668 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
SEC61A1-206ENST00000491668 MT1AP04731 61 aa3.83□□□□□ -1.8
SEC61A1-206ENST00000491668 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
SEC61A1-206ENST00000491668 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
SEC61A1-206ENST00000491668 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
SEC61A1-206ENST00000491668 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
SEC61A1-206ENST00000491668 MT3P25713 68 aa3.63□□□□□ -1.83
SEC61A1-206ENST00000491668 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
SEC61A1-206ENST00000491668 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
SEC61A1-206ENST00000491668 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
SEC61A1-206ENST00000491668 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
SEC61A1-206ENST00000491668 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
SEC61A1-206ENST00000491668 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
SEC61A1-206ENST00000491668 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
SEC61A1-206ENST00000491668 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
SEC61A1-206ENST00000491668 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
SEC61A1-206ENST00000491668 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
SEC61A1-206ENST00000491668 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
SEC61A1-206ENST00000491668 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
SEC61A1-206ENST00000491668 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
SEC61A1-206ENST00000491668 LCE1CQ5T751 118 aa3□□□□□ -1.93
SEC61A1-206ENST00000491668 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
SEC61A1-206ENST00000491668 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
SEC61A1-206ENST00000491668 INE1O15225 51 aa2.67□□□□□ -1.98
SEC61A1-206ENST00000491668 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
SEC61A1-206ENST00000491668 PRM1P04553 51 aa2.44□□□□□ -2.02
SEC61A1-206ENST00000491668 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
SEC61A1-206ENST00000491668 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SEC61A1-206ENST00000491668 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SEC61A1-206ENST00000491668 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms