RNA–Protein interactions for RNA: ENST00000491274.5

SDHB-208, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-208ENST00000491274 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
SDHB-208ENST00000491274 KRTAP8-1Q8IUC2 63 aa2.7□□□□□ -1.98
SDHB-208ENST00000491274 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
SDHB-208ENST00000491274 KRTAP12-2P59991 146 aa2.69□□□□□ -1.98
SDHB-208ENST00000491274 SPATA8Q6RVD6 105 aa2.69□□□□□ -1.98
SDHB-208ENST00000491274 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
SDHB-208ENST00000491274 SPRR2FQ96RM1 72 aa2.68□□□□□ -1.98
SDHB-208ENST00000491274 ATP5EP56381 51 aaPredicted RBP2.67□□□□□ -1.98
SDHB-208ENST00000491274 KMT2DO14686 5537 aa2.65□□□□□ -1.98
SDHB-208ENST00000491274 BRK1Q8WUW1 75 aa2.65□□□□□ -1.99
SDHB-208ENST00000491274 PRR15LQ9BU68 103 aa2.65□□□□□ -1.99
SDHB-208ENST00000491274 SPRR2EP22531 72 aa2.63□□□□□ -1.99
SDHB-208ENST00000491274 SPRR2BP35325 72 aa2.63□□□□□ -1.99
SDHB-208ENST00000491274 SPRR2AP35326 72 aa2.63□□□□□ -1.99
SDHB-208ENST00000491274 KRTAP25-1Q3LHN0 102 aa2.63□□□□□ -1.99
SDHB-208ENST00000491274 MUC12Q9UKN1 5478 aa2.63□□□□□ -1.99
SDHB-208ENST00000491274 TMEM258P61165 79 aa2.62□□□□□ -1.99
SDHB-208ENST00000491274 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
SDHB-208ENST00000491274 MDN1Q9NU22 5596 aa2.61□□□□□ -1.99
SDHB-208ENST00000491274 KRTAP12-1P59990 96 aa2.6□□□□□ -1.99
SDHB-208ENST00000491274 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
SDHB-208ENST00000491274 LINC01558Q9Y6Z2 57 aa2.58□□□□□ -2
SDHB-208ENST00000491274 KRTAP2-3P0C7H8 128 aa2.57□□□□□ -2
SDHB-208ENST00000491274 KRTAP2-4Q9BYR9 128 aa2.57□□□□□ -2
SDHB-208ENST00000491274 SPRR2DP22532 72 aa2.55□□□□□ -2
SDHB-208ENST00000491274 UQCR11O14957 56 aa2.54□□□□□ -2
SDHB-208ENST00000491274 TNP1P09430 55 aa2.51□□□□□ -2.01
SDHB-208ENST00000491274 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
SDHB-208ENST00000491274 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
SDHB-208ENST00000491274 MIR22HGQ0VDD5 57 aa2.49□□□□□ -2.01
SDHB-208ENST00000491274 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
SDHB-208ENST00000491274 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
SDHB-208ENST00000491274 C10orf95Q9H7T3 257 aa2.48□□□□□ -2.01
SDHB-208ENST00000491274 KRTAP19-7Q3SYF9 63 aa2.47□□□□□ -2.01
SDHB-208ENST00000491274 MT1EP04732 61 aa2.46□□□□□ -2.02
SDHB-208ENST00000491274 ROMO1P60602 79 aa2.46□□□□□ -2.02
SDHB-208ENST00000491274 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
SDHB-208ENST00000491274 Q1T7F1 81 aa2.45□□□□□ -2.02
SDHB-208ENST00000491274 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
SDHB-208ENST00000491274 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
SDHB-208ENST00000491274 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
SDHB-208ENST00000491274 PP632Q6XCG6 107 aa2.41□□□□□ -2.02
SDHB-208ENST00000491274 MT1GP13640 62 aa2.4□□□□□ -2.03
SDHB-208ENST00000491274 DSTQ03001 7570 aaKnown RBP2.4□□□□□ -2.03
SDHB-208ENST00000491274 MT1LQ93083 61 aa2.36□□□□□ -2.03
SDHB-208ENST00000491274 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
SDHB-208ENST00000491274 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
SDHB-208ENST00000491274 KRTAP12-3P60328 96 aa2.35□□□□□ -2.03
SDHB-208ENST00000491274 MT1MQ8N339 61 aa2.33□□□□□ -2.04
SDHB-208ENST00000491274 CDC42SE1Q9NRR8 79 aa2.32□□□□□ -2.04
SDHB-208ENST00000491274 KRTAP4-3Q9BYR4 195 aa2.29□□□□□ -2.04
SDHB-208ENST00000491274 MT4P47944 62 aa2.23□□□□□ -2.05
SDHB-208ENST00000491274 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
SDHB-208ENST00000491274 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
SDHB-208ENST00000491274 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
SDHB-208ENST00000491274 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
SDHB-208ENST00000491274 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
SDHB-208ENST00000491274 INE1O15225 51 aa2.06□□□□□ -2.08
SDHB-208ENST00000491274 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
SDHB-208ENST00000491274 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
SDHB-208ENST00000491274 MT1AP04731 61 aa2.01□□□□□ -2.09
SDHB-208ENST00000491274 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
SDHB-208ENST00000491274 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
SDHB-208ENST00000491274 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
SDHB-208ENST00000491274 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
SDHB-208ENST00000491274 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
SDHB-208ENST00000491274 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
SDHB-208ENST00000491274 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
SDHB-208ENST00000491274 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
SDHB-208ENST00000491274 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
SDHB-208ENST00000491274 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
SDHB-208ENST00000491274 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
SDHB-208ENST00000491274 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
SDHB-208ENST00000491274 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
SDHB-208ENST00000491274 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
SDHB-208ENST00000491274 PRM1P04553 51 aa1.16□□□□□ -2.22
SDHB-208ENST00000491274 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
SDHB-208ENST00000491274 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 140.7 ms