RNA–Protein interactions for RNA: ENST00000491031.5

CENPO-208, Transcript of centromere protein O, human

TSL 2

Gene CENPO, Length 1,579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CENPO-208	ENST00000491031	LCE1D	Q5T752	114 aa		5.18	□□□□□ -1.58
CENPO-208	ENST00000491031	SPRR2E	P22531	72 aa		5.14	□□□□□ -1.59
CENPO-208	ENST00000491031	SPRR2B	P35325	72 aa		5.14	□□□□□ -1.59
CENPO-208	ENST00000491031	SPRR2A	P35326	72 aa		5.14	□□□□□ -1.59
CENPO-208	ENST00000491031	MDN1	Q9NU22	5596 aa		5.14	□□□□□ -1.59
CENPO-208	ENST00000491031	KRTAP2-3	P0C7H8	128 aa		5.12	□□□□□ -1.59
CENPO-208	ENST00000491031	KRTAP2-4	Q9BYR9	128 aa		5.12	□□□□□ -1.59
CENPO-208	ENST00000491031	LCE5A	Q5TCM9	118 aa		5.08	□□□□□ -1.6
CENPO-208	ENST00000491031	CAMK2N1	Q7Z7J9	78 aa		5.06	□□□□□ -1.6
CENPO-208	ENST00000491031	LCE1A	Q5T7P2	110 aa		5.03	□□□□□ -1.6
CENPO-208	ENST00000491031	KRTAP10-12	P60413	245 aa		5.02	□□□□□ -1.61
CENPO-208	ENST00000491031	C10orf95	Q9H7T3	257 aa		5.02	□□□□□ -1.61
CENPO-208	ENST00000491031	KRTAP10-7	P60409	375 aa	Predicted RBP	4.99	□□□□□ -1.61
CENPO-208	ENST00000491031	KRTAP4-7	Q9BYR0	210 aa		4.99	□□□□□ -1.61
CENPO-208	ENST00000491031	SPRR2D	P22532	72 aa		4.98	□□□□□ -1.61
CENPO-208	ENST00000491031	KRTAP4-9	Q9BYQ8	210 aa		4.98	□□□□□ -1.61
CENPO-208	ENST00000491031	KRTAP2-2	Q9BYT5	123 aa		4.96	□□□□□ -1.62
CENPO-208	ENST00000491031	KRTAP2-1	Q9BYU5	128 aa		4.96	□□□□□ -1.62
CENPO-208	ENST00000491031	KRTAP13-4	Q3LI77	160 aa		4.87	□□□□□ -1.63
CENPO-208	ENST00000491031	KRTAP4-11	Q9BYQ6	195 aa		4.87	□□□□□ -1.63
CENPO-208	ENST00000491031		A0A0D9SG42	100 aa		4.81	□□□□□ -1.64
CENPO-208	ENST00000491031	KRTAP12-1	P59990	96 aa		4.78	□□□□□ -1.64
CENPO-208	ENST00000491031	KRTAP4-2	Q9BYR5	136 aa		4.78	□□□□□ -1.64
CENPO-208	ENST00000491031	PP632	Q6XCG6	107 aa		4.7	□□□□□ -1.66
CENPO-208	ENST00000491031	MT1E	P04732	61 aa		4.68	□□□□□ -1.66
CENPO-208	ENST00000491031	KRTAP19-7	Q3SYF9	63 aa		4.68	□□□□□ -1.66
CENPO-208	ENST00000491031	KRTAP19-3	Q7Z4W3	81 aa		4.68	□□□□□ -1.66
CENPO-208	ENST00000491031	INE1	O15225	51 aa		4.64	□□□□□ -1.67
CENPO-208	ENST00000491031	SPRR5	A0A1B0GTR4	108 aa		4.59	□□□□□ -1.67
CENPO-208	ENST00000491031	MT1G	P13640	62 aa		4.57	□□□□□ -1.68
CENPO-208	ENST00000491031	KRTAP19-5	Q3LI72	72 aa		4.57	□□□□□ -1.68
CENPO-208	ENST00000491031	TNP1	P09430	55 aa		4.55	□□□□□ -1.68
CENPO-208	ENST00000491031	DST	Q03001	7570 aa	Known RBP	4.5	□□□□□ -1.69
CENPO-208	ENST00000491031	MT1L	Q93083	61 aa		4.46	□□□□□ -1.7
CENPO-208	ENST00000491031	MT1M	Q8N339	61 aa		4.45	□□□□□ -1.7
CENPO-208	ENST00000491031	LCE3A	Q5TA76	89 aa		4.44	□□□□□ -1.7
CENPO-208	ENST00000491031	GPR98	Q8WXG9	6306 aa		4.39	□□□□□ -1.71
CENPO-208	ENST00000491031	MT4	P47944	62 aa		4.32	□□□□□ -1.72
CENPO-208	ENST00000491031	KRTAP12-3	P60328	96 aa		4.32	□□□□□ -1.72
CENPO-208	ENST00000491031	KRTAP5-4	Q6L8H1	288 aa		4.27	□□□□□ -1.73
CENPO-208	ENST00000491031	HMCN1	Q96RW7	5635 aa		4.26	□□□□□ -1.73
CENPO-208	ENST00000491031	KRTAP4-3	Q9BYR4	195 aa		4.26	□□□□□ -1.73
CENPO-208	ENST00000491031	AHNAK2	Q8IVF2	5795 aa		4.1	□□□□□ -1.75
CENPO-208	ENST00000491031	KRTAP5-10	Q6L8G5	202 aa		4.09	□□□□□ -1.75
CENPO-208	ENST00000491031	KRTAP12-4	P60329	112 aa		4.08	□□□□□ -1.76
CENPO-208	ENST00000491031	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.07	□□□□□ -1.76
CENPO-208	ENST00000491031	KRTAP20-2	Q3LI61	65 aa		4.04	□□□□□ -1.76
CENPO-208	ENST00000491031	KRTAP5-3	Q6L8H2	238 aa		4.02	□□□□□ -1.77
CENPO-208	ENST00000491031	LCE3C	Q5T5A8	94 aa		3.97	□□□□□ -1.77
CENPO-208	ENST00000491031	KRTAP5-7	Q6L8G8	165 aa		3.97	□□□□□ -1.77
CENPO-208	ENST00000491031	MT3	P25713	68 aa		3.94	□□□□□ -1.78
CENPO-208	ENST00000491031	MT1A	P04731	61 aa		3.81	□□□□□ -1.8
CENPO-208	ENST00000491031	SYNE1	Q8NF91	8797 aa	Known RBP	3.8	□□□□□ -1.8
CENPO-208	ENST00000491031	KRTAP6-1	Q3LI64	71 aa		3.74	□□□□□ -1.81
CENPO-208	ENST00000491031	KRTAP5-2	Q701N4	177 aa		3.74	□□□□□ -1.81
CENPO-208	ENST00000491031	LCE1F	Q5T754	118 aa		3.68	□□□□□ -1.82
CENPO-208	ENST00000491031	KRTAP9-6	A8MVA2	160 aa		3.64	□□□□□ -1.83
CENPO-208	ENST00000491031	KRTAP6-2	Q3LI66	62 aa		3.6	□□□□□ -1.83
CENPO-208	ENST00000491031	KRTAP5-8	O75690	187 aa		3.56	□□□□□ -1.84
CENPO-208	ENST00000491031	AHNAK	Q09666	5890 aa	Known RBP	3.43	□□□□□ -1.86
CENPO-208	ENST00000491031	MUC5AC	P98088	5654 aa		3.42	□□□□□ -1.86
CENPO-208	ENST00000491031	LCE1E	Q5T753	118 aa		3.4	□□□□□ -1.87
CENPO-208	ENST00000491031	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.39	□□□□□ -1.87
CENPO-208	ENST00000491031	OBSCN	Q5VST9	7968 aa		3.35	□□□□□ -1.87
CENPO-208	ENST00000491031	KRTAP5-1	Q6L8H4	278 aa		3.34	□□□□□ -1.87
CENPO-208	ENST00000491031	KRTAP5-11	Q6L8G4	156 aa		3.29	□□□□□ -1.88
CENPO-208	ENST00000491031	LCE3E	Q5T5B0	92 aa		3.15	□□□□□ -1.91
CENPO-208	ENST00000491031	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.05	□□□□□ -1.92
CENPO-208	ENST00000491031	LCE1B	Q5T7P3	118 aa		3.02	□□□□□ -1.93
CENPO-208	ENST00000491031	LCE1C	Q5T751	118 aa		3.01	□□□□□ -1.93
CENPO-208	ENST00000491031	LCE3D	Q9BYE3	92 aa		2.87	□□□□□ -1.95
CENPO-208	ENST00000491031	PRM1	P04553	51 aa		2.86	□□□□□ -1.95
CENPO-208	ENST00000491031	KRTAP4-4	Q9BYR3	166 aa		2.55	□□□□□ -2
CENPO-208	ENST00000491031	KRTAP21-2	Q3LI59	83 aa		2.46	□□□□□ -2.02
CENPO-208	ENST00000491031	PHGR1	C9JFL3	82 aa		2.41	□□□□□ -2.02
CENPO-208	ENST00000491031	MUC19	Q7Z5P9	8384 aa		2.07	□□□□□ -2.08
CENPO-208	ENST00000491031	KRTAP21-1	Q3LI58	79 aa		1.99	□□□□□ -2.09
CENPO-208	ENST00000491031	MUC16	Q8WXI7	14507 aa		1.5	□□□□□ -2.17

Retrieved 78 of 20,778 RNA–protein pairs in 37.7 ms