RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
EXOSC3-207ENST00000490516 ATOX1O00244 68 aa4.56□□□□□ -1.68
EXOSC3-207ENST00000490516 COX7CP15954 63 aa4.56□□□□□ -1.68
EXOSC3-207ENST00000490516 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
EXOSC3-207ENST00000490516 SMIM26A0A096LP01 95 aa4.51□□□□□ -1.69
EXOSC3-207ENST00000490516 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
EXOSC3-207ENST00000490516 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
EXOSC3-207ENST00000490516 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
EXOSC3-207ENST00000490516 LINC00643Q86TS7 51 aa4.49□□□□□ -1.69
EXOSC3-207ENST00000490516 SERP2Q8N6R1 65 aa4.46□□□□□ -1.7
EXOSC3-207ENST00000490516 LINC00208Q96KT6 92 aa4.46□□□□□ -1.7
EXOSC3-207ENST00000490516 HIST1H4AP62805 103 aaKnown RBP4.43□□□□□ -1.7
EXOSC3-207ENST00000490516 KRTAP13-4Q3LI77 160 aa4.42□□□□□ -1.7
EXOSC3-207ENST00000490516 C10orf95Q9H7T3 257 aa4.42□□□□□ -1.7
EXOSC3-207ENST00000490516 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
EXOSC3-207ENST00000490516 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
EXOSC3-207ENST00000490516 ATP5EP2Q5VTU8 51 aa4.35□□□□□ -1.71
EXOSC3-207ENST00000490516 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
EXOSC3-207ENST00000490516 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
EXOSC3-207ENST00000490516 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
EXOSC3-207ENST00000490516 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
EXOSC3-207ENST00000490516 TRAV7A0A075B6U4 112 aa4.27□□□□□ -1.73
EXOSC3-207ENST00000490516 MP68P56378 58 aa4.27□□□□□ -1.73
EXOSC3-207ENST00000490516 H7BZZ5 65 aa4.24□□□□□ -1.73
EXOSC3-207ENST00000490516 Q1T7F1 81 aa4.23□□□□□ -1.73
EXOSC3-207ENST00000490516 SPTSSBQ8NFR3 76 aa4.22□□□□□ -1.73
EXOSC3-207ENST00000490516 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
EXOSC3-207ENST00000490516 OCR1Q9BZK8 76 aa4.16□□□□□ -1.74
EXOSC3-207ENST00000490516 ACYP2P14621 99 aa4.14□□□□□ -1.75
EXOSC3-207ENST00000490516 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
EXOSC3-207ENST00000490516 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
EXOSC3-207ENST00000490516 H3BPC8 53 aa4.08□□□□□ -1.76
EXOSC3-207ENST00000490516 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
EXOSC3-207ENST00000490516 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
EXOSC3-207ENST00000490516 KRTAP12-1P59990 96 aa4.06□□□□□ -1.76
EXOSC3-207ENST00000490516 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
EXOSC3-207ENST00000490516 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
EXOSC3-207ENST00000490516 TNP1P09430 55 aa4.04□□□□□ -1.76
EXOSC3-207ENST00000490516 PSPHP1O15172 72 aa4.03□□□□□ -1.76
EXOSC3-207ENST00000490516 MT1AP04731 61 aa4.03□□□□□ -1.76
EXOSC3-207ENST00000490516 SPATA8Q6RVD6 105 aa4.03□□□□□ -1.76
EXOSC3-207ENST00000490516 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
EXOSC3-207ENST00000490516 SNURFQ9Y675 71 aa4.02□□□□□ -1.77
EXOSC3-207ENST00000490516 A6NED7 52 aa3.94□□□□□ -1.78
EXOSC3-207ENST00000490516 SPANXA2-OT1Q8N9U9 137 aa3.94□□□□□ -1.78
EXOSC3-207ENST00000490516 PRR15LQ9BU68 103 aa3.88□□□□□ -1.79
EXOSC3-207ENST00000490516 LINC01558Q9Y6Z2 57 aa3.85□□□□□ -1.79
EXOSC3-207ENST00000490516 A0A1B0GU33 70 aa3.8□□□□□ -1.8
EXOSC3-207ENST00000490516 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
EXOSC3-207ENST00000490516 A8MU10 97 aa3.73□□□□□ -1.81
EXOSC3-207ENST00000490516 ROMO1P60602 79 aa3.73□□□□□ -1.81
EXOSC3-207ENST00000490516 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
EXOSC3-207ENST00000490516 COA5Q86WW8 74 aa3.71□□□□□ -1.82
EXOSC3-207ENST00000490516 K7ERS5 55 aa3.7□□□□□ -1.82
EXOSC3-207ENST00000490516 MT3P25713 68 aa3.7□□□□□ -1.82
EXOSC3-207ENST00000490516 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
EXOSC3-207ENST00000490516 UQCR11O14957 56 aa3.68□□□□□ -1.82
EXOSC3-207ENST00000490516 MIR22HGQ0VDD5 57 aa3.67□□□□□ -1.82
EXOSC3-207ENST00000490516 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
EXOSC3-207ENST00000490516 A0A1B0GU69 56 aa3.57□□□□□ -1.84
EXOSC3-207ENST00000490516 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
EXOSC3-207ENST00000490516 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
EXOSC3-207ENST00000490516 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
EXOSC3-207ENST00000490516 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
EXOSC3-207ENST00000490516 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
EXOSC3-207ENST00000490516 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
EXOSC3-207ENST00000490516 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
EXOSC3-207ENST00000490516 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
EXOSC3-207ENST00000490516 INE1O15225 51 aa3.05□□□□□ -1.92
EXOSC3-207ENST00000490516 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
EXOSC3-207ENST00000490516 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
EXOSC3-207ENST00000490516 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
EXOSC3-207ENST00000490516 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
EXOSC3-207ENST00000490516 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
EXOSC3-207ENST00000490516 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
EXOSC3-207ENST00000490516 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
EXOSC3-207ENST00000490516 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
EXOSC3-207ENST00000490516 PRM1P04553 51 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 13.8 ms