RNA–Protein interactions for RNA: ENST00000490389.1

FARP1-207, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-207ENST00000490389 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
FARP1-207ENST00000490389 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
FARP1-207ENST00000490389 TNP1P09430 55 aa4.77□□□□□ -1.65
FARP1-207ENST00000490389 NEBP20929 6669 aa4.74□□□□□ -1.65
FARP1-207ENST00000490389 SPRR2EP22531 72 aa4.7□□□□□ -1.66
FARP1-207ENST00000490389 SPRR2BP35325 72 aa4.7□□□□□ -1.66
FARP1-207ENST00000490389 SPRR2AP35326 72 aa4.7□□□□□ -1.66
FARP1-207ENST00000490389 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
FARP1-207ENST00000490389 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
FARP1-207ENST00000490389 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
FARP1-207ENST00000490389 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
FARP1-207ENST00000490389 KRTAP25-1Q3LHN0 102 aa4.62□□□□□ -1.67
FARP1-207ENST00000490389 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
FARP1-207ENST00000490389 MT1EP04732 61 aa4.59□□□□□ -1.67
FARP1-207ENST00000490389 ROMO1P60602 79 aa4.56□□□□□ -1.68
FARP1-207ENST00000490389 SPRR2DP22532 72 aa4.54□□□□□ -1.68
FARP1-207ENST00000490389 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
FARP1-207ENST00000490389 BRK1Q8WUW1 75 aa4.53□□□□□ -1.68
FARP1-207ENST00000490389 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
FARP1-207ENST00000490389 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
FARP1-207ENST00000490389 KRTAP2-3P0C7H8 128 aa4.46□□□□□ -1.7
FARP1-207ENST00000490389 KRTAP2-4Q9BYR9 128 aa4.46□□□□□ -1.7
FARP1-207ENST00000490389 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
FARP1-207ENST00000490389 MT1LQ93083 61 aa4.43□□□□□ -1.7
FARP1-207ENST00000490389 MT1GP13640 62 aa4.41□□□□□ -1.7
FARP1-207ENST00000490389 MT3P25713 68 aa4.39□□□□□ -1.71
FARP1-207ENST00000490389 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
FARP1-207ENST00000490389 MT1MQ8N339 61 aa4.35□□□□□ -1.71
FARP1-207ENST00000490389 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
FARP1-207ENST00000490389 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
FARP1-207ENST00000490389 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
FARP1-207ENST00000490389 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
FARP1-207ENST00000490389 PMAIP1Q13794 54 aa4.26□□□□□ -1.73
FARP1-207ENST00000490389 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
FARP1-207ENST00000490389 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
FARP1-207ENST00000490389 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
FARP1-207ENST00000490389 NDUFAF8A1L188 74 aa4□□□□□ -1.77
FARP1-207ENST00000490389 MT4P47944 62 aa3.97□□□□□ -1.77
FARP1-207ENST00000490389 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
FARP1-207ENST00000490389 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
FARP1-207ENST00000490389 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
FARP1-207ENST00000490389 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
FARP1-207ENST00000490389 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
FARP1-207ENST00000490389 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
FARP1-207ENST00000490389 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
FARP1-207ENST00000490389 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
FARP1-207ENST00000490389 MT1AP04731 61 aa3.77□□□□□ -1.81
FARP1-207ENST00000490389 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
FARP1-207ENST00000490389 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
FARP1-207ENST00000490389 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
FARP1-207ENST00000490389 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
FARP1-207ENST00000490389 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
FARP1-207ENST00000490389 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
FARP1-207ENST00000490389 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
FARP1-207ENST00000490389 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
FARP1-207ENST00000490389 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
FARP1-207ENST00000490389 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
FARP1-207ENST00000490389 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
FARP1-207ENST00000490389 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
FARP1-207ENST00000490389 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
FARP1-207ENST00000490389 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
FARP1-207ENST00000490389 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
FARP1-207ENST00000490389 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
FARP1-207ENST00000490389 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
FARP1-207ENST00000490389 MUC5ACP98088 5654 aa3.09□□□□□ -1.92
FARP1-207ENST00000490389 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
FARP1-207ENST00000490389 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
FARP1-207ENST00000490389 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
FARP1-207ENST00000490389 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
FARP1-207ENST00000490389 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
FARP1-207ENST00000490389 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
FARP1-207ENST00000490389 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
FARP1-207ENST00000490389 INE1O15225 51 aa2.4□□□□□ -2.03
FARP1-207ENST00000490389 PRM1P04553 51 aa2.36□□□□□ -2.03
FARP1-207ENST00000490389 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
FARP1-207ENST00000490389 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
FARP1-207ENST00000490389 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
FARP1-207ENST00000490389 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms