RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SYCP2Q9BX26 1530 aa-1.45□□□□□ -2.64
CD46-216ENST00000490278 RB1CC1Q8TDY2 1594 aa-1.45□□□□□ -2.64
CD46-216ENST00000490278 CCDC180Q9P1Z9 1646 aa-1.45□□□□□ -2.64
CD46-216ENST00000490278 H0YGX0 51 aa-1.46□□□□□ -2.64
CD46-216ENST00000490278 S100ZQ8WXG8 99 aa-1.46□□□□□ -2.64
CD46-216ENST00000490278 ASPMQ8IZT6 3477 aa-1.46□□□□□ -2.64
CD46-216ENST00000490278 MROH2AA6NES4 1674 aa-1.46□□□□□ -2.64
CD46-216ENST00000490278 SMCO4Q9NRQ5 59 aa-1.47□□□□□ -2.64
CD46-216ENST00000490278 CPS1P31327 1500 aa-1.47□□□□□ -2.64
CD46-216ENST00000490278 LOC400499M0QZD8 3231 aa-1.48□□□□□ -2.65
CD46-216ENST00000490278 NRXN3Q9Y4C0 1643 aa-1.48□□□□□ -2.65
CD46-216ENST00000490278 PDCD5O14737 125 aa-1.49□□□□□ -2.65
CD46-216ENST00000490278 SMIM2Q9BVW6 85 aa-1.5□□□□□ -2.65
CD46-216ENST00000490278 PLNP26678 52 aa-1.51□□□□□ -2.65
CD46-216ENST00000490278 BRCA2P51587 3418 aa-1.51□□□□□ -2.65
CD46-216ENST00000490278 AGLP35573 1532 aa-1.52□□□□□ -2.65
CD46-216ENST00000490278 DDX60Q8IY21 1712 aaKnown RBP-1.54□□□□□ -2.66
CD46-216ENST00000490278 EFCAB5A4FU69 1503 aa-1.56□□□□□ -2.66
CD46-216ENST00000490278 CDH23Q9H251 3354 aa-1.56□□□□□ -2.66
CD46-216ENST00000490278 CENPFP49454 3210 aa-1.57□□□□□ -2.66
CD46-216ENST00000490278 A0A096LNI7 61 aa-1.57□□□□□ -2.66
CD46-216ENST00000490278 TOMM7Q9P0U1 55 aa-1.57□□□□□ -2.66
CD46-216ENST00000490278 NFAT5O94916 1531 aa-1.57□□□□□ -2.66
CD46-216ENST00000490278 IQGAP1P46940 1657 aa-1.58□□□□□ -2.66
CD46-216ENST00000490278 CLTCL1P53675 1640 aa-1.58□□□□□ -2.66
CD46-216ENST00000490278 HTN1P15515 57 aa-1.58□□□□□ -2.66
CD46-216ENST00000490278 DEFB133Q30KQ1 61 aa-1.58□□□□□ -2.66
CD46-216ENST00000490278 VCANP13611 3396 aa-1.59□□□□□ -2.66
CD46-216ENST00000490278 ABCA10Q8WWZ4 1543 aa-1.6□□□□□ -2.67
CD46-216ENST00000490278 PRXQ9BXM0 1461 aa-1.62□□□□□ -2.67
CD46-216ENST00000490278 A0A087WWC5 75 aa-1.62□□□□□ -2.67
CD46-216ENST00000490278 RHPN1-AS1Q9BWJ2 59 aa-1.62□□□□□ -2.67
CD46-216ENST00000490278 NDUFA1O15239 70 aa-1.63□□□□□ -2.67
CD46-216ENST00000490278 SMIM5Q71RC9 77 aa-1.63□□□□□ -2.67
CD46-216ENST00000490278 ABCA5Q8WWZ7 1642 aa-1.63□□□□□ -2.67
CD46-216ENST00000490278 TRPM2O94759 1503 aa-1.64□□□□□ -2.67
CD46-216ENST00000490278 VPS13AQ96RL7 3174 aa-1.66□□□□□ -2.68
CD46-216ENST00000490278 LINC01590Q5TEZ4 76 aa-1.67□□□□□ -2.68
CD46-216ENST00000490278 CD52P31358 61 aa-1.7□□□□□ -2.68
CD46-216ENST00000490278 ABCC8Q09428 1581 aa-1.7□□□□□ -2.68
CD46-216ENST00000490278 CMC2Q9NRP2 79 aa-1.7□□□□□ -2.68
CD46-216ENST00000490278 ADCY10Q96PN6 1610 aa-1.72□□□□□ -2.68
CD46-216ENST00000490278 FANCD2Q9BXW9 1451 aa-1.73□□□□□ -2.69
CD46-216ENST00000490278 KRTAP19-2Q3LHN2 52 aa-1.73□□□□□ -2.69
CD46-216ENST00000490278 RPL39P62891 51 aaKnown RBP-1.74□□□□□ -2.69
CD46-216ENST00000490278 DEFB104AQ8WTQ1 72 aa-1.74□□□□□ -2.69
CD46-216ENST00000490278 ERICH3Q5RHP9 1530 aa-1.75□□□□□ -2.69
CD46-216ENST00000490278 DUOX1Q9NRD9 1551 aa-1.76□□□□□ -2.69
CD46-216ENST00000490278 RPL39LQ96EH5 51 aaKnown RBP-1.8□□□□□ -2.7
CD46-216ENST00000490278 DEFB124Q8NES8 71 aa-1.81□□□□□ -2.7
CD46-216ENST00000490278 LINC01556Q5JQF7 62 aa-1.83□□□□□ -2.7
CD46-216ENST00000490278 UTRNP46939 3433 aa-1.84□□□□□ -2.7
CD46-216ENST00000490278 TOP2AP11388 1531 aaKnown RBP-1.86□□□□□ -2.71
CD46-216ENST00000490278 SAMD9LQ8IVG5 1584 aa-1.86□□□□□ -2.71
CD46-216ENST00000490278 SMIM31A0A1B0GVY4 71 aa-1.9□□□□□ -2.71
CD46-216ENST00000490278 ATP7AQ04656 1500 aa-1.92□□□□□ -2.72
CD46-216ENST00000490278 MROH2BQ7Z745 1585 aa-1.96□□□□□ -2.72
CD46-216ENST00000490278 SNRPGP15A8MWD9 76 aa-1.96□□□□□ -2.72
CD46-216ENST00000490278 APELAP0DMC3 54 aa-1.96□□□□□ -2.72
CD46-216ENST00000490278 A0A096LPF7 62 aa-1.99□□□□□ -2.73
CD46-216ENST00000490278 H3BUX3 64 aa-2.01□□□□□ -2.73
CD46-216ENST00000490278 TOMM5Q8N4H5 51 aa-2.01□□□□□ -2.73
CD46-216ENST00000490278 GOLGB1Q14789 3259 aaKnown RBP-2.02□□□□□ -2.73
CD46-216ENST00000490278 IQGAP2Q13576 1575 aa-2.03□□□□□ -2.73
CD46-216ENST00000490278 HTN3P15516 51 aa-2.11□□□□□ -2.75
CD46-216ENST00000490278 K7EIM0 57 aa-2.12□□□□□ -2.75
CD46-216ENST00000490278 ARHGAP5-AS1Q96IT6 56 aa-2.12□□□□□ -2.75
CD46-216ENST00000490278 PRCDQ00LT1 54 aa-2.16□□□□□ -2.76
CD46-216ENST00000490278 TMEM167AQ8TBQ9 72 aa-2.18□□□□□ -2.76
CD46-216ENST00000490278 H3BSH0 61 aa-2.28□□□□□ -2.77
CD46-216ENST00000490278 RPL39P5Q59GN2 51 aa-2.3□□□□□ -2.78
CD46-216ENST00000490278 DEFB108AA8MXU0 73 aa-2.31□□□□□ -2.78
CD46-216ENST00000490278 SNRPGP62308 76 aaKnown RBP-2.32□□□□□ -2.78
CD46-216ENST00000490278 GCC2Q8IWJ2 1684 aa-2.34□□□□□ -2.78
CD46-216ENST00000490278 Q9Y3F1 56 aa-2.46□□□□□ -2.8
CD46-216ENST00000490278 DEFB108BQ8NET1 73 aa-2.51□□□□□ -2.81
CD46-216ENST00000490278 COX14Q96I36 57 aa-2.55□□□□□ -2.82
CD46-216ENST00000490278 STATHP02808 62 aa-2.81□□□□□ -2.86
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms