RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 A0A0D9SG42 100 aa4.62□□□□□ -1.67
SRSF4-204ENST00000489898 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
SRSF4-204ENST00000489898 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
SRSF4-204ENST00000489898 A8MU10 97 aa4.6□□□□□ -1.67
SRSF4-204ENST00000489898 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
SRSF4-204ENST00000489898 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
SRSF4-204ENST00000489898 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
SRSF4-204ENST00000489898 SPINT4Q6UDR6 99 aa4.53□□□□□ -1.68
SRSF4-204ENST00000489898 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
SRSF4-204ENST00000489898 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
SRSF4-204ENST00000489898 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
SRSF4-204ENST00000489898 MT1EP04732 61 aa4.46□□□□□ -1.7
SRSF4-204ENST00000489898 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
SRSF4-204ENST00000489898 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
SRSF4-204ENST00000489898 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
SRSF4-204ENST00000489898 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
SRSF4-204ENST00000489898 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
SRSF4-204ENST00000489898 ROMO1P60602 79 aa4.38□□□□□ -1.71
SRSF4-204ENST00000489898 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
SRSF4-204ENST00000489898 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
SRSF4-204ENST00000489898 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
SRSF4-204ENST00000489898 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
SRSF4-204ENST00000489898 MT1MQ8N339 61 aa4.24□□□□□ -1.73
SRSF4-204ENST00000489898 MT1LQ93083 61 aa4.24□□□□□ -1.73
SRSF4-204ENST00000489898 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
SRSF4-204ENST00000489898 MT1GP13640 62 aa4.22□□□□□ -1.73
SRSF4-204ENST00000489898 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
SRSF4-204ENST00000489898 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
SRSF4-204ENST00000489898 TNP1P09430 55 aa4.18□□□□□ -1.74
SRSF4-204ENST00000489898 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
SRSF4-204ENST00000489898 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
SRSF4-204ENST00000489898 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
SRSF4-204ENST00000489898 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
SRSF4-204ENST00000489898 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
SRSF4-204ENST00000489898 MT4P47944 62 aa4.06□□□□□ -1.76
SRSF4-204ENST00000489898 KRTAP23-1A1A580 65 aa4□□□□□ -1.77
SRSF4-204ENST00000489898 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
SRSF4-204ENST00000489898 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
SRSF4-204ENST00000489898 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
SRSF4-204ENST00000489898 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
SRSF4-204ENST00000489898 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
SRSF4-204ENST00000489898 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
SRSF4-204ENST00000489898 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
SRSF4-204ENST00000489898 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
SRSF4-204ENST00000489898 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
SRSF4-204ENST00000489898 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
SRSF4-204ENST00000489898 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
SRSF4-204ENST00000489898 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
SRSF4-204ENST00000489898 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
SRSF4-204ENST00000489898 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
SRSF4-204ENST00000489898 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
SRSF4-204ENST00000489898 MT1AP04731 61 aa3.58□□□□□ -1.84
SRSF4-204ENST00000489898 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
SRSF4-204ENST00000489898 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
SRSF4-204ENST00000489898 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
SRSF4-204ENST00000489898 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
SRSF4-204ENST00000489898 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
SRSF4-204ENST00000489898 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
SRSF4-204ENST00000489898 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
SRSF4-204ENST00000489898 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
SRSF4-204ENST00000489898 MT3P25713 68 aa3.18□□□□□ -1.9
SRSF4-204ENST00000489898 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
SRSF4-204ENST00000489898 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
SRSF4-204ENST00000489898 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
SRSF4-204ENST00000489898 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
SRSF4-204ENST00000489898 INE1O15225 51 aa2.87□□□□□ -1.95
SRSF4-204ENST00000489898 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
SRSF4-204ENST00000489898 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
SRSF4-204ENST00000489898 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
SRSF4-204ENST00000489898 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
SRSF4-204ENST00000489898 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
SRSF4-204ENST00000489898 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
SRSF4-204ENST00000489898 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
SRSF4-204ENST00000489898 PRM1P04553 51 aa2.26□□□□□ -2.05
SRSF4-204ENST00000489898 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
SRSF4-204ENST00000489898 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
SRSF4-204ENST00000489898 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
SRSF4-204ENST00000489898 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms