RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	SPRR2A	P35326	72 aa		4.39	□□□□□ -1.71
GGA1-222	ENST00000489772		A0A1B0GU69	56 aa		4.38	□□□□□ -1.71
GGA1-222	ENST00000489772	GPR98	Q8WXG9	6306 aa		4.37	□□□□□ -1.71
GGA1-222	ENST00000489772	SPINT4	Q6UDR6	99 aa		4.34	□□□□□ -1.71
GGA1-222	ENST00000489772	BRK1	Q8WUW1	75 aa		4.34	□□□□□ -1.71
GGA1-222	ENST00000489772	KRTAP5-11	Q6L8G4	156 aa		4.33	□□□□□ -1.72
GGA1-222	ENST00000489772	LCE1A	Q5T7P2	110 aa		4.32	□□□□□ -1.72
GGA1-222	ENST00000489772	KRTAP2-3	P0C7H8	128 aa		4.29	□□□□□ -1.72
GGA1-222	ENST00000489772	PRR15L	Q9BU68	103 aa		4.29	□□□□□ -1.72
GGA1-222	ENST00000489772	KRTAP2-4	Q9BYR9	128 aa		4.29	□□□□□ -1.72
GGA1-222	ENST00000489772	LINC01558	Q9Y6Z2	57 aa		4.29	□□□□□ -1.72
GGA1-222	ENST00000489772	KRTAP12-1	P59990	96 aa		4.28	□□□□□ -1.72
GGA1-222	ENST00000489772		A8MU10	97 aa		4.24	□□□□□ -1.73
GGA1-222	ENST00000489772	SPRR2D	P22532	72 aa		4.24	□□□□□ -1.73
GGA1-222	ENST00000489772	KTN1-AS1	Q86SY8	53 aa		4.23	□□□□□ -1.73
GGA1-222	ENST00000489772		A6NED7	52 aa		4.21	□□□□□ -1.74
GGA1-222	ENST00000489772	CDC42SE1	Q9NRR8	79 aa		4.19	□□□□□ -1.74
GGA1-222	ENST00000489772	KRTAP2-2	Q9BYT5	123 aa		4.16	□□□□□ -1.74
GGA1-222	ENST00000489772	KRTAP2-1	Q9BYU5	128 aa		4.16	□□□□□ -1.74
GGA1-222	ENST00000489772	KRTAP19-7	Q3SYF9	63 aa		4.14	□□□□□ -1.75
GGA1-222	ENST00000489772	UQCR11	O14957	56 aa		4.13	□□□□□ -1.75
GGA1-222	ENST00000489772	MT1E	P04732	61 aa		4.13	□□□□□ -1.75
GGA1-222	ENST00000489772	TNP1	P09430	55 aa		4.1	□□□□□ -1.75
GGA1-222	ENST00000489772	C10orf95	Q9H7T3	257 aa		4.1	□□□□□ -1.75
GGA1-222	ENST00000489772	KRTAP19-5	Q3LI72	72 aa		4.08	□□□□□ -1.76
GGA1-222	ENST00000489772	KRTAP19-3	Q7Z4W3	81 aa		4.08	□□□□□ -1.76
GGA1-222	ENST00000489772	DST	Q03001	7570 aa	Known RBP	4.06	□□□□□ -1.76
GGA1-222	ENST00000489772	LCE1E	Q5T753	118 aa		4.05	□□□□□ -1.76
GGA1-222	ENST00000489772	MIR22HG	Q0VDD5	57 aa		4.04	□□□□□ -1.76
GGA1-222	ENST00000489772		K7ERS5	55 aa		4.02	□□□□□ -1.77
GGA1-222	ENST00000489772	LUZP6	Q538Z0	58 aa		4.02	□□□□□ -1.77
GGA1-222	ENST00000489772	LCE3A	Q5TA76	89 aa		4.02	□□□□□ -1.77
GGA1-222	ENST00000489772	MT1G	P13640	62 aa		4	□□□□□ -1.77
GGA1-222	ENST00000489772	PP632	Q6XCG6	107 aa		3.98	□□□□□ -1.77
GGA1-222	ENST00000489772	MT1L	Q93083	61 aa		3.95	□□□□□ -1.78
GGA1-222	ENST00000489772	NDUFAF8	A1L188	74 aa		3.91	□□□□□ -1.78
GGA1-222	ENST00000489772	MT1M	Q8N339	61 aa		3.91	□□□□□ -1.78
GGA1-222	ENST00000489772	KRTAP25-1	Q3LHN0	102 aa		3.9	□□□□□ -1.78
GGA1-222	ENST00000489772	KRTAP12-3	P60328	96 aa		3.89	□□□□□ -1.79
GGA1-222	ENST00000489772	KRTAP5-1	Q6L8H4	278 aa		3.86	□□□□□ -1.79
GGA1-222	ENST00000489772	KRTAP4-3	Q9BYR4	195 aa		3.8	□□□□□ -1.8
GGA1-222	ENST00000489772	KRTAP5-4	Q6L8H1	288 aa		3.76	□□□□□ -1.81
GGA1-222	ENST00000489772	KRTAP4-4	Q9BYR3	166 aa		3.72	□□□□□ -1.81
GGA1-222	ENST00000489772	HMCN1	Q96RW7	5635 aa		3.71	□□□□□ -1.82
GGA1-222	ENST00000489772	MT4	P47944	62 aa		3.7	□□□□□ -1.82
GGA1-222	ENST00000489772	ROMO1	P60602	79 aa		3.7	□□□□□ -1.82
GGA1-222	ENST00000489772	AHNAK2	Q8IVF2	5795 aa		3.65	□□□□□ -1.82
GGA1-222	ENST00000489772	LCE3C	Q5T5A8	94 aa		3.58	□□□□□ -1.84
GGA1-222	ENST00000489772	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.58	□□□□□ -1.84
GGA1-222	ENST00000489772	MT3	P25713	68 aa		3.53	□□□□□ -1.84
GGA1-222	ENST00000489772	SPRR5	A0A1B0GTR4	108 aa		3.51	□□□□□ -1.85
GGA1-222	ENST00000489772	KRTAP5-10	Q6L8G5	202 aa		3.51	□□□□□ -1.85
GGA1-222	ENST00000489772	SYNE1	Q8NF91	8797 aa	Known RBP	3.5	□□□□□ -1.85
GGA1-222	ENST00000489772	KRTAP12-4	P60329	112 aa		3.5	□□□□□ -1.85
GGA1-222	ENST00000489772	KRTAP20-2	Q3LI61	65 aa		3.48	□□□□□ -1.85
GGA1-222	ENST00000489772	KRTAP5-7	Q6L8G8	165 aa		3.47	□□□□□ -1.85
GGA1-222	ENST00000489772	KRTAP9-6	A8MVA2	160 aa		3.46	□□□□□ -1.86
GGA1-222	ENST00000489772	MT1A	P04731	61 aa		3.36	□□□□□ -1.87
GGA1-222	ENST00000489772	KRTAP6-1	Q3LI64	71 aa		3.33	□□□□□ -1.88
GGA1-222	ENST00000489772	OBSCN	Q5VST9	7968 aa		3.33	□□□□□ -1.88
GGA1-222	ENST00000489772	AHNAK	Q09666	5890 aa	Known RBP	3.29	□□□□□ -1.88
GGA1-222	ENST00000489772	KRTAP5-2	Q701N4	177 aa		3.23	□□□□□ -1.89
GGA1-222	ENST00000489772	KRTAP6-2	Q3LI66	62 aa		3.18	□□□□□ -1.9
GGA1-222	ENST00000489772	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.15	□□□□□ -1.91
GGA1-222	ENST00000489772	MUC5AC	P98088	5654 aa		3.11	□□□□□ -1.91
GGA1-222	ENST00000489772	LCE1F	Q5T754	118 aa		3.1	□□□□□ -1.91
GGA1-222	ENST00000489772	INE1	O15225	51 aa		3.08	□□□□□ -1.92
GGA1-222	ENST00000489772	KRTAP5-8	O75690	187 aa		3.04	□□□□□ -1.92
GGA1-222	ENST00000489772	LCE3E	Q5T5B0	92 aa		2.68	□□□□□ -1.98
GGA1-222	ENST00000489772	LCE1B	Q5T7P3	118 aa		2.65	□□□□□ -1.98
GGA1-222	ENST00000489772	LCE1C	Q5T751	118 aa		2.61	□□□□□ -1.99
GGA1-222	ENST00000489772	LCE3D	Q9BYE3	92 aa		2.61	□□□□□ -1.99
GGA1-222	ENST00000489772	MUC19	Q7Z5P9	8384 aa		2.2	□□□□□ -2.06
GGA1-222	ENST00000489772	KRTAP21-2	Q3LI59	83 aa		2.2	□□□□□ -2.06
GGA1-222	ENST00000489772	PHGR1	C9JFL3	82 aa		2.1	□□□□□ -2.07
GGA1-222	ENST00000489772	PRM1	P04553	51 aa		1.92	□□□□□ -2.1
GGA1-222	ENST00000489772	KRTAP21-1	Q3LI58	79 aa		1.57	□□□□□ -2.16
GGA1-222	ENST00000489772	MUC16	Q8WXI7	14507 aa		1.31	□□□□□ -2.2

Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms