RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 MT1EP04732 61 aa5.96□□□□□ -1.46
CLIC4-203ENST00000489758 LCE1AQ5T7P2 110 aa5.96□□□□□ -1.46
CLIC4-203ENST00000489758 KRTAP2-2Q9BYT5 123 aa5.95□□□□□ -1.46
CLIC4-203ENST00000489758 KRTAP2-1Q9BYU5 128 aa5.95□□□□□ -1.46
CLIC4-203ENST00000489758 SPRR2DP22532 72 aa5.92□□□□□ -1.46
CLIC4-203ENST00000489758 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
CLIC4-203ENST00000489758 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
CLIC4-203ENST00000489758 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
CLIC4-203ENST00000489758 LCE3BQ5TA77 95 aa5.77□□□□□ -1.49
CLIC4-203ENST00000489758 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.49
CLIC4-203ENST00000489758 MT1LQ93083 61 aa5.76□□□□□ -1.49
CLIC4-203ENST00000489758 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
CLIC4-203ENST00000489758 PMAIP1Q13794 54 aa5.74□□□□□ -1.49
CLIC4-203ENST00000489758 PRO0628Q9UI54 55 aa5.73□□□□□ -1.49
CLIC4-203ENST00000489758 MT1GP13640 62 aa5.7□□□□□ -1.5
CLIC4-203ENST00000489758 MT1MQ8N339 61 aa5.63□□□□□ -1.51
CLIC4-203ENST00000489758 KRTAP4-12Q9BQ66 201 aa5.61□□□□□ -1.51
CLIC4-203ENST00000489758 KRTAP9-9Q9BYP9 154 aa5.61□□□□□ -1.51
CLIC4-203ENST00000489758 KRTAP9-4Q9BYQ2 154 aa5.61□□□□□ -1.51
CLIC4-203ENST00000489758 KRTAP15-1Q3LI76 137 aa5.59□□□□□ -1.51
CLIC4-203ENST00000489758 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
CLIC4-203ENST00000489758 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
CLIC4-203ENST00000489758 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
CLIC4-203ENST00000489758 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
CLIC4-203ENST00000489758 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
CLIC4-203ENST00000489758 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
CLIC4-203ENST00000489758 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
CLIC4-203ENST00000489758 GPR98Q8WXG9 6306 aa5.4□□□□□ -1.55
CLIC4-203ENST00000489758 KTN1-AS1Q86SY8 53 aa5.37□□□□□ -1.55
CLIC4-203ENST00000489758 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
CLIC4-203ENST00000489758 MT4P47944 62 aa5.2□□□□□ -1.58
CLIC4-203ENST00000489758 LCE4AQ5TA78 99 aa5.19□□□□□ -1.58
CLIC4-203ENST00000489758 KRTAP4-2Q9BYR5 136 aa5.17□□□□□ -1.58
CLIC4-203ENST00000489758 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
CLIC4-203ENST00000489758 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
CLIC4-203ENST00000489758 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
CLIC4-203ENST00000489758 HMCN1Q96RW7 5635 aa5.07□□□□□ -1.6
CLIC4-203ENST00000489758 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
CLIC4-203ENST00000489758 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
CLIC4-203ENST00000489758 AHNAK2Q8IVF2 5795 aa4.96□□□□□ -1.61
CLIC4-203ENST00000489758 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
CLIC4-203ENST00000489758 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
CLIC4-203ENST00000489758 MT1AP04731 61 aa4.9□□□□□ -1.63
CLIC4-203ENST00000489758 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
CLIC4-203ENST00000489758 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
CLIC4-203ENST00000489758 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
CLIC4-203ENST00000489758 KRTAP5-7Q6L8G8 165 aa4.8□□□□□ -1.64
CLIC4-203ENST00000489758 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
CLIC4-203ENST00000489758 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
CLIC4-203ENST00000489758 KRTAP5-2Q701N4 177 aa4.58□□□□□ -1.68
CLIC4-203ENST00000489758 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
CLIC4-203ENST00000489758 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
CLIC4-203ENST00000489758 MT3P25713 68 aa4.44□□□□□ -1.7
CLIC4-203ENST00000489758 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
CLIC4-203ENST00000489758 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
CLIC4-203ENST00000489758 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
CLIC4-203ENST00000489758 AHNAKQ09666 5890 aaKnown RBP4.13□□□□□ -1.75
CLIC4-203ENST00000489758 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
CLIC4-203ENST00000489758 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
CLIC4-203ENST00000489758 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
CLIC4-203ENST00000489758 LCE1EQ5T753 118 aa4□□□□□ -1.77
CLIC4-203ENST00000489758 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
CLIC4-203ENST00000489758 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
CLIC4-203ENST00000489758 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
CLIC4-203ENST00000489758 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
CLIC4-203ENST00000489758 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
CLIC4-203ENST00000489758 H3BS24 57 aa3.53□□□□□ -1.84
CLIC4-203ENST00000489758 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
CLIC4-203ENST00000489758 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
CLIC4-203ENST00000489758 INE1O15225 51 aa3.33□□□□□ -1.88
CLIC4-203ENST00000489758 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
CLIC4-203ENST00000489758 PRM1P04553 51 aa3.12□□□□□ -1.91
CLIC4-203ENST00000489758 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
CLIC4-203ENST00000489758 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
CLIC4-203ENST00000489758 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
CLIC4-203ENST00000489758 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
CLIC4-203ENST00000489758 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
CLIC4-203ENST00000489758 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms