RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
EXOSC3-206ENST00000489414 RBM12B-AS1Q9P1G2 102 aa3.41□□□□□ -1.86
EXOSC3-206ENST00000489414 S4R3F8 94 aa3.38□□□□□ -1.87
EXOSC3-206ENST00000489414 H1FX-AS1Q4G0G2 97 aa3.37□□□□□ -1.87
EXOSC3-206ENST00000489414 MIR22HGQ0VDD5 57 aa3.36□□□□□ -1.87
EXOSC3-206ENST00000489414 LCA10Q71F78 164 aa3.36□□□□□ -1.87
EXOSC3-206ENST00000489414 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
EXOSC3-206ENST00000489414 SPATA8Q6RVD6 105 aa3.34□□□□□ -1.87
EXOSC3-206ENST00000489414 A0A1B0GU33 70 aa3.32□□□□□ -1.88
EXOSC3-206ENST00000489414 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
EXOSC3-206ENST00000489414 A8MU10 97 aa3.31□□□□□ -1.88
EXOSC3-206ENST00000489414 CSAG1Q6PB30 78 aa3.3□□□□□ -1.88
EXOSC3-206ENST00000489414 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
EXOSC3-206ENST00000489414 K7ERS5 55 aa3.27□□□□□ -1.89
EXOSC3-206ENST00000489414 H0YAA0 97 aa3.24□□□□□ -1.89
EXOSC3-206ENST00000489414 ADM2Q7Z4H4 148 aa3.23□□□□□ -1.89
EXOSC3-206ENST00000489414 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
EXOSC3-206ENST00000489414 M0QZ58 72 aa3.19□□□□□ -1.9
EXOSC3-206ENST00000489414 P0C880 135 aa3.18□□□□□ -1.9
EXOSC3-206ENST00000489414 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
EXOSC3-206ENST00000489414 SPRR2GQ9BYE4 73 aa3.18□□□□□ -1.9
EXOSC3-206ENST00000489414 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
EXOSC3-206ENST00000489414 A0A0D9SG42 100 aa3.16□□□□□ -1.9
EXOSC3-206ENST00000489414 KRTAP12-2P59991 146 aa3.15□□□□□ -1.91
EXOSC3-206ENST00000489414 R4GN34 69 aa3.14□□□□□ -1.91
EXOSC3-206ENST00000489414 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
EXOSC3-206ENST00000489414 SPINT4Q6UDR6 99 aa3.1□□□□□ -1.91
EXOSC3-206ENST00000489414 ROMO1P60602 79 aa3.08□□□□□ -1.92
EXOSC3-206ENST00000489414 LINC01554Q52M75 96 aa3.08□□□□□ -1.92
EXOSC3-206ENST00000489414 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
EXOSC3-206ENST00000489414 KRTAP12-1P59990 96 aa3.06□□□□□ -1.92
EXOSC3-206ENST00000489414 PRAC1Q96KF2 57 aa3.06□□□□□ -1.92
EXOSC3-206ENST00000489414 CRIPTQ9P021 101 aa3.06□□□□□ -1.92
EXOSC3-206ENST00000489414 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
EXOSC3-206ENST00000489414 MT1XP80297 61 aa3.04□□□□□ -1.92
EXOSC3-206ENST00000489414 PRO2289Q9P1D8 64 aa3.04□□□□□ -1.92
EXOSC3-206ENST00000489414 KRTAP25-1Q3LHN0 102 aa2.99□□□□□ -1.93
EXOSC3-206ENST00000489414 MT3P25713 68 aa2.97□□□□□ -1.93
EXOSC3-206ENST00000489414 CAMK2N1Q7Z7J9 78 aa2.97□□□□□ -1.93
EXOSC3-206ENST00000489414 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
EXOSC3-206ENST00000489414 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
EXOSC3-206ENST00000489414 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
EXOSC3-206ENST00000489414 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
EXOSC3-206ENST00000489414 C10orf95Q9H7T3 257 aa2.87□□□□□ -1.95
EXOSC3-206ENST00000489414 SYNE1Q8NF91 8797 aaKnown RBP2.87□□□□□ -1.95
EXOSC3-206ENST00000489414 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
EXOSC3-206ENST00000489414 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
EXOSC3-206ENST00000489414 TNP1P09430 55 aa2.84□□□□□ -1.95
EXOSC3-206ENST00000489414 PP632Q6XCG6 107 aa2.84□□□□□ -1.95
EXOSC3-206ENST00000489414 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
EXOSC3-206ENST00000489414 MT1EP04732 61 aa2.75□□□□□ -1.97
EXOSC3-206ENST00000489414 KRTAP19-7Q3SYF9 63 aa2.74□□□□□ -1.97
EXOSC3-206ENST00000489414 MT1GP13640 62 aa2.73□□□□□ -1.97
EXOSC3-206ENST00000489414 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
EXOSC3-206ENST00000489414 MT1MQ8N339 61 aa2.69□□□□□ -1.98
EXOSC3-206ENST00000489414 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
EXOSC3-206ENST00000489414 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
EXOSC3-206ENST00000489414 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
EXOSC3-206ENST00000489414 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
EXOSC3-206ENST00000489414 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
EXOSC3-206ENST00000489414 NDUFAF8A1L188 74 aa2.54□□□□□ -2
EXOSC3-206ENST00000489414 KRTAP12-3P60328 96 aa2.54□□□□□ -2
EXOSC3-206ENST00000489414 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
EXOSC3-206ENST00000489414 MT1LQ93083 61 aa2.46□□□□□ -2.02
EXOSC3-206ENST00000489414 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
EXOSC3-206ENST00000489414 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
EXOSC3-206ENST00000489414 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
EXOSC3-206ENST00000489414 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
EXOSC3-206ENST00000489414 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
EXOSC3-206ENST00000489414 INE1O15225 51 aa2.14□□□□□ -2.07
EXOSC3-206ENST00000489414 KRTAP6-1Q3LI64 71 aa2.13□□□□□ -2.07
EXOSC3-206ENST00000489414 MT1AP04731 61 aa2.06□□□□□ -2.08
EXOSC3-206ENST00000489414 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
EXOSC3-206ENST00000489414 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
EXOSC3-206ENST00000489414 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
EXOSC3-206ENST00000489414 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
EXOSC3-206ENST00000489414 PRM1P04553 51 aa1.59□□□□□ -2.15
EXOSC3-206ENST00000489414 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms