RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 LEAP2Q969E1 77 aa1.26□□□□□ -2.21
CCL20-204ENST00000489160 KRTAP2-4Q9BYR9 128 aa1.26□□□□□ -2.21
CCL20-204ENST00000489160 H3BSH0 61 aa1.25□□□□□ -2.21
CCL20-204ENST00000489160 KMT2DO14686 5537 aa1.25□□□□□ -2.21
CCL20-204ENST00000489160 SMR3BP02814 79 aaPredicted RBP1.24□□□□□ -2.21
CCL20-204ENST00000489160 CLPSL2Q6UWE3 100 aa1.24□□□□□ -2.21
CCL20-204ENST00000489160 DNAH8Q96JB1 4490 aa1.23□□□□□ -2.21
CCL20-204ENST00000489160 USH2AO75445 5202 aa1.22□□□□□ -2.21
CCL20-204ENST00000489160 A8MTW9 85 aa1.21□□□□□ -2.22
CCL20-204ENST00000489160 TOMM7Q9P0U1 55 aa1.21□□□□□ -2.22
CCL20-204ENST00000489160 DEFB136Q30KP8 78 aa1.2□□□□□ -2.22
CCL20-204ENST00000489160 MT1HL1P0DM35 61 aa1.19□□□□□ -2.22
CCL20-204ENST00000489160 KRTAP2-1Q9BYU5 128 aa1.19□□□□□ -2.22
CCL20-204ENST00000489160 H3BUX3 64 aa1.18□□□□□ -2.22
CCL20-204ENST00000489160 K7EIM0 57 aa1.18□□□□□ -2.22
CCL20-204ENST00000489160 TMEM167AQ8TBQ9 72 aa1.17□□□□□ -2.22
CCL20-204ENST00000489160 MUC5BQ9HC84 5762 aaPredicted RBP1.16□□□□□ -2.22
CCL20-204ENST00000489160 AHNAKQ09666 5890 aaKnown RBP1.16□□□□□ -2.22
CCL20-204ENST00000489160 SPINK1P00995 79 aa1.16□□□□□ -2.22
CCL20-204ENST00000489160 MUC12Q9UKN1 5478 aa1.16□□□□□ -2.22
CCL20-204ENST00000489160 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
CCL20-204ENST00000489160 MUC17Q685J3 4493 aa1.14□□□□□ -2.23
CCL20-204ENST00000489160 DSTQ03001 7570 aaKnown RBP1.14□□□□□ -2.23
CCL20-204ENST00000489160 M0QZ58 72 aa1.13□□□□□ -2.23
CCL20-204ENST00000489160 SPINK6Q6UWN8 80 aa1.13□□□□□ -2.23
CCL20-204ENST00000489160 DEFB104AQ8WTQ1 72 aa1.13□□□□□ -2.23
CCL20-204ENST00000489160 DEFB4AO15263 64 aa1.11□□□□□ -2.23
CCL20-204ENST00000489160 DEFB135Q30KP9 77 aa1.11□□□□□ -2.23
CCL20-204ENST00000489160 RPL39P5Q59GN2 51 aa1.07□□□□□ -2.24
CCL20-204ENST00000489160 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
CCL20-204ENST00000489160 M0R2T5 61 aa1.05□□□□□ -2.24
CCL20-204ENST00000489160 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
CCL20-204ENST00000489160 MT1HP80294 61 aa1.04□□□□□ -2.24
CCL20-204ENST00000489160 FLGP20930 4061 aaPredicted RBP1.04□□□□□ -2.24
CCL20-204ENST00000489160 MUC5ACP98088 5654 aa1.03□□□□□ -2.25
CCL20-204ENST00000489160 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
CCL20-204ENST00000489160 C9orf92A6NGG3 77 aa1.02□□□□□ -2.25
CCL20-204ENST00000489160 TNP1P09430 55 aa1.01□□□□□ -2.25
CCL20-204ENST00000489160 HTN3P15516 51 aa1.01□□□□□ -2.25
CCL20-204ENST00000489160 KRTAP19-2Q3LHN2 52 aa1.01□□□□□ -2.25
CCL20-204ENST00000489160 KRTAP19-6Q3LI70 58 aa1.01□□□□□ -2.25
CCL20-204ENST00000489160 SPRR2EP22531 72 aa0.99□□□□□ -2.25
CCL20-204ENST00000489160 SPRR2BP35325 72 aa0.99□□□□□ -2.25
CCL20-204ENST00000489160 SPRR2AP35326 72 aa0.99□□□□□ -2.25
CCL20-204ENST00000489160 SPRR2DP22532 72 aa0.97□□□□□ -2.25
CCL20-204ENST00000489160 SPART-AS1P0CW21 52 aa0.94□□□□□ -2.26
CCL20-204ENST00000489160 APELAP0DMC3 54 aa0.92□□□□□ -2.26
CCL20-204ENST00000489160 RHPN1-AS1Q9BWJ2 59 aa0.92□□□□□ -2.26
CCL20-204ENST00000489160 H3BNG1 76 aa0.91□□□□□ -2.26
CCL20-204ENST00000489160 MT1FP04733 61 aa0.91□□□□□ -2.26
CCL20-204ENST00000489160 MT4P47944 62 aa0.9□□□□□ -2.27
CCL20-204ENST00000489160 A0A096LPF7 62 aa0.89□□□□□ -2.27
CCL20-204ENST00000489160 MT2AP02795 61 aa0.89□□□□□ -2.27
CCL20-204ENST00000489160 SPRR2FQ96RM1 72 aa0.88□□□□□ -2.27
CCL20-204ENST00000489160 DEFB1P60022 68 aa0.87□□□□□ -2.27
CCL20-204ENST00000489160 PRM1P04553 51 aa0.86□□□□□ -2.27
CCL20-204ENST00000489160 HTN1P15515 57 aa0.83□□□□□ -2.28
CCL20-204ENST00000489160 A0A096LNI7 61 aa0.82□□□□□ -2.28
CCL20-204ENST00000489160 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
CCL20-204ENST00000489160 LINC01556Q5JQF7 62 aa0.8□□□□□ -2.28
CCL20-204ENST00000489160 MT1BP07438 61 aa0.74□□□□□ -2.29
CCL20-204ENST00000489160 MT1AP04731 61 aa0.73□□□□□ -2.29
CCL20-204ENST00000489160 RPS29P62273 56 aaKnown RBP0.73□□□□□ -2.29
CCL20-204ENST00000489160 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
CCL20-204ENST00000489160 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
CCL20-204ENST00000489160 KRTAP20-2Q3LI61 65 aa0.7□□□□□ -2.3
CCL20-204ENST00000489160 SYNE1Q8NF91 8797 aaKnown RBP0.69□□□□□ -2.3
CCL20-204ENST00000489160 KRTAP19-5Q3LI72 72 aa0.66□□□□□ -2.3
CCL20-204ENST00000489160 KRTAP6-2Q3LI66 62 aa0.64□□□□□ -2.31
CCL20-204ENST00000489160 KRTAP19-8Q3LI54 63 aa0.63□□□□□ -2.31
CCL20-204ENST00000489160 MT1XP80297 61 aa0.6□□□□□ -2.31
CCL20-204ENST00000489160 SPRR2GQ9BYE4 73 aa0.57□□□□□ -2.32
CCL20-204ENST00000489160 MT1EP04732 61 aa0.55□□□□□ -2.32
CCL20-204ENST00000489160 MT1MQ8N339 61 aa0.55□□□□□ -2.32
CCL20-204ENST00000489160 KRTAP19-7Q3SYF9 63 aa0.54□□□□□ -2.32
CCL20-204ENST00000489160 MT1GP13640 62 aa0.49□□□□□ -2.33
CCL20-204ENST00000489160 MT1LQ93083 61 aa0.48□□□□□ -2.33
CCL20-204ENST00000489160 KRTAP6-1Q3LI64 71 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 552.9 ms