RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 MIR22HGQ0VDD5 57 aa4.37□□□□□ -1.71
ARHGEF39-204ENST00000488918 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
ARHGEF39-204ENST00000488918 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
ARHGEF39-204ENST00000488918 SPRR2DP22532 72 aa4.35□□□□□ -1.71
ARHGEF39-204ENST00000488918 KRTAP12-1P59990 96 aa4.35□□□□□ -1.71
ARHGEF39-204ENST00000488918 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.71
ARHGEF39-204ENST00000488918 A8MU10 97 aa4.32□□□□□ -1.72
ARHGEF39-204ENST00000488918 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
ARHGEF39-204ENST00000488918 K7ERS5 55 aa4.28□□□□□ -1.72
ARHGEF39-204ENST00000488918 TNP1P09430 55 aa4.24□□□□□ -1.73
ARHGEF39-204ENST00000488918 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
ARHGEF39-204ENST00000488918 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
ARHGEF39-204ENST00000488918 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
ARHGEF39-204ENST00000488918 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
ARHGEF39-204ENST00000488918 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
ARHGEF39-204ENST00000488918 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
ARHGEF39-204ENST00000488918 MT1EP04732 61 aa4.13□□□□□ -1.75
ARHGEF39-204ENST00000488918 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
ARHGEF39-204ENST00000488918 KRTAP19-5Q3LI72 72 aa4.12□□□□□ -1.75
ARHGEF39-204ENST00000488918 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
ARHGEF39-204ENST00000488918 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
ARHGEF39-204ENST00000488918 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
ARHGEF39-204ENST00000488918 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
ARHGEF39-204ENST00000488918 MT1GP13640 62 aa4.06□□□□□ -1.76
ARHGEF39-204ENST00000488918 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
ARHGEF39-204ENST00000488918 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
ARHGEF39-204ENST00000488918 ROMO1P60602 79 aa4.01□□□□□ -1.77
ARHGEF39-204ENST00000488918 MT1LQ93083 61 aa3.97□□□□□ -1.77
ARHGEF39-204ENST00000488918 KRTAP12-3P60328 96 aa3.96□□□□□ -1.78
ARHGEF39-204ENST00000488918 MT1MQ8N339 61 aa3.94□□□□□ -1.78
ARHGEF39-204ENST00000488918 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
ARHGEF39-204ENST00000488918 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
ARHGEF39-204ENST00000488918 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
ARHGEF39-204ENST00000488918 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
ARHGEF39-204ENST00000488918 MT4P47944 62 aa3.78□□□□□ -1.8
ARHGEF39-204ENST00000488918 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
ARHGEF39-204ENST00000488918 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
ARHGEF39-204ENST00000488918 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
ARHGEF39-204ENST00000488918 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
ARHGEF39-204ENST00000488918 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
ARHGEF39-204ENST00000488918 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
ARHGEF39-204ENST00000488918 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
ARHGEF39-204ENST00000488918 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
ARHGEF39-204ENST00000488918 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
ARHGEF39-204ENST00000488918 MT1AP04731 61 aa3.4□□□□□ -1.87
ARHGEF39-204ENST00000488918 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
ARHGEF39-204ENST00000488918 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
ARHGEF39-204ENST00000488918 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
ARHGEF39-204ENST00000488918 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
ARHGEF39-204ENST00000488918 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
ARHGEF39-204ENST00000488918 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
ARHGEF39-204ENST00000488918 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
ARHGEF39-204ENST00000488918 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
ARHGEF39-204ENST00000488918 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
ARHGEF39-204ENST00000488918 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
ARHGEF39-204ENST00000488918 MT3P25713 68 aa3.17□□□□□ -1.9
ARHGEF39-204ENST00000488918 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
ARHGEF39-204ENST00000488918 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
ARHGEF39-204ENST00000488918 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
ARHGEF39-204ENST00000488918 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
ARHGEF39-204ENST00000488918 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
ARHGEF39-204ENST00000488918 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
ARHGEF39-204ENST00000488918 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
ARHGEF39-204ENST00000488918 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
ARHGEF39-204ENST00000488918 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
ARHGEF39-204ENST00000488918 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
ARHGEF39-204ENST00000488918 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
ARHGEF39-204ENST00000488918 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
ARHGEF39-204ENST00000488918 INE1O15225 51 aa2.69□□□□□ -1.98
ARHGEF39-204ENST00000488918 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
ARHGEF39-204ENST00000488918 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
ARHGEF39-204ENST00000488918 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
ARHGEF39-204ENST00000488918 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
ARHGEF39-204ENST00000488918 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
ARHGEF39-204ENST00000488918 PRM1P04553 51 aa2.04□□□□□ -2.08
ARHGEF39-204ENST00000488918 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
ARHGEF39-204ENST00000488918 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
ARHGEF39-204ENST00000488918 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 97.2 ms