RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
TNFSF4-203ENST00000488053 Q5W150 140 aa2.94□□□□□ -1.94
TNFSF4-203ENST00000488053 H1FX-AS1Q4G0G2 97 aa2.93□□□□□ -1.94
TNFSF4-203ENST00000488053 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.94
TNFSF4-203ENST00000488053 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
TNFSF4-203ENST00000488053 A0A1B0GU33 70 aa2.89□□□□□ -1.95
TNFSF4-203ENST00000488053 H0YAA0 97 aa2.85□□□□□ -1.95
TNFSF4-203ENST00000488053 MT1BP07438 61 aa2.85□□□□□ -1.95
TNFSF4-203ENST00000488053 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
TNFSF4-203ENST00000488053 CAMK2N1Q7Z7J9 78 aa2.83□□□□□ -1.96
TNFSF4-203ENST00000488053 CRIPTQ9P021 101 aa2.83□□□□□ -1.96
TNFSF4-203ENST00000488053 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
TNFSF4-203ENST00000488053 S4R3F8 94 aa2.82□□□□□ -1.96
TNFSF4-203ENST00000488053 NEBP20929 6669 aa2.82□□□□□ -1.96
TNFSF4-203ENST00000488053 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
TNFSF4-203ENST00000488053 KRTAP19-8Q3LI54 63 aa2.79□□□□□ -1.96
TNFSF4-203ENST00000488053 SPRR2GQ9BYE4 73 aa2.79□□□□□ -1.96
TNFSF4-203ENST00000488053 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
TNFSF4-203ENST00000488053 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
TNFSF4-203ENST00000488053 KMT2DO14686 5537 aa2.75□□□□□ -1.97
TNFSF4-203ENST00000488053 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
TNFSF4-203ENST00000488053 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
TNFSF4-203ENST00000488053 SPRR2FQ96RM1 72 aa2.7□□□□□ -1.98
TNFSF4-203ENST00000488053 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
TNFSF4-203ENST00000488053 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
TNFSF4-203ENST00000488053 SPRR2EP22531 72 aa2.68□□□□□ -1.98
TNFSF4-203ENST00000488053 SPRR2BP35325 72 aa2.68□□□□□ -1.98
TNFSF4-203ENST00000488053 SPRR2AP35326 72 aa2.68□□□□□ -1.98
TNFSF4-203ENST00000488053 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
TNFSF4-203ENST00000488053 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
TNFSF4-203ENST00000488053 PLAC4Q8WY50 150 aa2.66□□□□□ -1.98
TNFSF4-203ENST00000488053 MT1XP80297 61 aa2.64□□□□□ -1.99
TNFSF4-203ENST00000488053 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
TNFSF4-203ENST00000488053 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
TNFSF4-203ENST00000488053 PRO2289Q9P1D8 64 aa2.62□□□□□ -1.99
TNFSF4-203ENST00000488053 SPRR2DP22532 72 aa2.6□□□□□ -1.99
TNFSF4-203ENST00000488053 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
TNFSF4-203ENST00000488053 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
TNFSF4-203ENST00000488053 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
TNFSF4-203ENST00000488053 A0A0D9SG42 100 aa2.59□□□□□ -1.99
TNFSF4-203ENST00000488053 R4GN34 69 aa2.57□□□□□ -2
TNFSF4-203ENST00000488053 M0QZ58 72 aa2.56□□□□□ -2
TNFSF4-203ENST00000488053 KRTAP12-1P59990 96 aa2.52□□□□□ -2.01
TNFSF4-203ENST00000488053 KRTAP13-4Q3LI77 160 aa2.52□□□□□ -2.01
TNFSF4-203ENST00000488053 INE1O15225 51 aa2.51□□□□□ -2.01
TNFSF4-203ENST00000488053 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
TNFSF4-203ENST00000488053 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
TNFSF4-203ENST00000488053 MT1EP04732 61 aa2.35□□□□□ -2.03
TNFSF4-203ENST00000488053 KRTAP19-7Q3SYF9 63 aa2.35□□□□□ -2.03
TNFSF4-203ENST00000488053 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.03
TNFSF4-203ENST00000488053 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.03
TNFSF4-203ENST00000488053 MT4P47944 62 aa2.3□□□□□ -2.04
TNFSF4-203ENST00000488053 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
TNFSF4-203ENST00000488053 TNP1P09430 55 aa2.27□□□□□ -2.05
TNFSF4-203ENST00000488053 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
TNFSF4-203ENST00000488053 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
TNFSF4-203ENST00000488053 MT1GP13640 62 aa2.26□□□□□ -2.05
TNFSF4-203ENST00000488053 MT1MQ8N339 61 aa2.25□□□□□ -2.05
TNFSF4-203ENST00000488053 MT1LQ93083 61 aa2.22□□□□□ -2.05
TNFSF4-203ENST00000488053 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
TNFSF4-203ENST00000488053 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
TNFSF4-203ENST00000488053 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
TNFSF4-203ENST00000488053 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
TNFSF4-203ENST00000488053 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
TNFSF4-203ENST00000488053 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
TNFSF4-203ENST00000488053 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
TNFSF4-203ENST00000488053 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
TNFSF4-203ENST00000488053 KRTAP6-1Q3LI64 71 aa1.9□□□□□ -2.11
TNFSF4-203ENST00000488053 MT1AP04731 61 aa1.88□□□□□ -2.11
TNFSF4-203ENST00000488053 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
TNFSF4-203ENST00000488053 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.11
TNFSF4-203ENST00000488053 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.11
TNFSF4-203ENST00000488053 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
TNFSF4-203ENST00000488053 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
TNFSF4-203ENST00000488053 PRM1P04553 51 aa1.51□□□□□ -2.17
TNFSF4-203ENST00000488053 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
TNFSF4-203ENST00000488053 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
TNFSF4-203ENST00000488053 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 101.5 ms