RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 M0QZ58 72 aa3.55□□□□□ -1.84
NECTIN3-209ENST00000488016 ROMO1P60602 79 aa3.54□□□□□ -1.84
NECTIN3-209ENST00000488016 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
NECTIN3-209ENST00000488016 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
NECTIN3-209ENST00000488016 ADM2Q7Z4H4 148 aa3.52□□□□□ -1.85
NECTIN3-209ENST00000488016 KRTAP19-6Q3LI70 58 aa3.51□□□□□ -1.85
NECTIN3-209ENST00000488016 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
NECTIN3-209ENST00000488016 MT1BP07438 61 aa3.47□□□□□ -1.85
NECTIN3-209ENST00000488016 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
NECTIN3-209ENST00000488016 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
NECTIN3-209ENST00000488016 CRIPTQ9P021 101 aa3.45□□□□□ -1.86
NECTIN3-209ENST00000488016 P0C880 135 aa3.43□□□□□ -1.86
NECTIN3-209ENST00000488016 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
NECTIN3-209ENST00000488016 A0A0D9SG42 100 aa3.42□□□□□ -1.86
NECTIN3-209ENST00000488016 KRTAP13-4Q3LI77 160 aa3.41□□□□□ -1.86
NECTIN3-209ENST00000488016 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
NECTIN3-209ENST00000488016 KMT2DO14686 5537 aa3.38□□□□□ -1.87
NECTIN3-209ENST00000488016 KRTAP12-1P59990 96 aa3.38□□□□□ -1.87
NECTIN3-209ENST00000488016 SPINT4Q6UDR6 99 aa3.38□□□□□ -1.87
NECTIN3-209ENST00000488016 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
NECTIN3-209ENST00000488016 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
NECTIN3-209ENST00000488016 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
NECTIN3-209ENST00000488016 R4GN34 69 aa3.37□□□□□ -1.87
NECTIN3-209ENST00000488016 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
NECTIN3-209ENST00000488016 MDN1Q9NU22 5596 aa3.35□□□□□ -1.87
NECTIN3-209ENST00000488016 MT1XP80297 61 aa3.28□□□□□ -1.88
NECTIN3-209ENST00000488016 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
NECTIN3-209ENST00000488016 PLAC4Q8WY50 150 aa3.24□□□□□ -1.89
NECTIN3-209ENST00000488016 KRTAP2-1Q9BYU5 128 aa3.23□□□□□ -1.89
NECTIN3-209ENST00000488016 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
NECTIN3-209ENST00000488016 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
NECTIN3-209ENST00000488016 C10orf95Q9H7T3 257 aa3.2□□□□□ -1.9
NECTIN3-209ENST00000488016 SPRR2EP22531 72 aa3.16□□□□□ -1.9
NECTIN3-209ENST00000488016 SPRR2BP35325 72 aa3.16□□□□□ -1.9
NECTIN3-209ENST00000488016 SPRR2AP35326 72 aa3.16□□□□□ -1.9
NECTIN3-209ENST00000488016 PRO2289Q9P1D8 64 aa3.16□□□□□ -1.9
NECTIN3-209ENST00000488016 TNP1P09430 55 aa3.13□□□□□ -1.91
NECTIN3-209ENST00000488016 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
NECTIN3-209ENST00000488016 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
NECTIN3-209ENST00000488016 KRTAP8-1Q8IUC2 63 aa3.09□□□□□ -1.91
NECTIN3-209ENST00000488016 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
NECTIN3-209ENST00000488016 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
NECTIN3-209ENST00000488016 SPRR2DP22532 72 aa3.05□□□□□ -1.92
NECTIN3-209ENST00000488016 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
NECTIN3-209ENST00000488016 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
NECTIN3-209ENST00000488016 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
NECTIN3-209ENST00000488016 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
NECTIN3-209ENST00000488016 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
NECTIN3-209ENST00000488016 MT1EP04732 61 aa2.89□□□□□ -1.95
NECTIN3-209ENST00000488016 KRTAP19-5Q3LI72 72 aa2.89□□□□□ -1.95
NECTIN3-209ENST00000488016 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
NECTIN3-209ENST00000488016 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
NECTIN3-209ENST00000488016 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
NECTIN3-209ENST00000488016 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
NECTIN3-209ENST00000488016 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
NECTIN3-209ENST00000488016 MT1LQ93083 61 aa2.78□□□□□ -1.96
NECTIN3-209ENST00000488016 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
NECTIN3-209ENST00000488016 MT4P47944 62 aa2.75□□□□□ -1.97
NECTIN3-209ENST00000488016 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
NECTIN3-209ENST00000488016 MT1MQ8N339 61 aa2.75□□□□□ -1.97
NECTIN3-209ENST00000488016 MT1GP13640 62 aa2.73□□□□□ -1.97
NECTIN3-209ENST00000488016 INE1O15225 51 aa2.67□□□□□ -1.98
NECTIN3-209ENST00000488016 KRTAP5-8O75690 187 aa2.55□□□□□ -2
NECTIN3-209ENST00000488016 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
NECTIN3-209ENST00000488016 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
NECTIN3-209ENST00000488016 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
NECTIN3-209ENST00000488016 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
NECTIN3-209ENST00000488016 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
NECTIN3-209ENST00000488016 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
NECTIN3-209ENST00000488016 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
NECTIN3-209ENST00000488016 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
NECTIN3-209ENST00000488016 MT1AP04731 61 aa2.34□□□□□ -2.03
NECTIN3-209ENST00000488016 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
NECTIN3-209ENST00000488016 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
NECTIN3-209ENST00000488016 PRM1P04553 51 aa1.8□□□□□ -2.12
NECTIN3-209ENST00000488016 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
NECTIN3-209ENST00000488016 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
NECTIN3-209ENST00000488016 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 48.6 ms